Abyssogena phaseoliformis symbiont: CVPH_0279
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Entry
CVPH_0279 CDS
T07717
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVPH_0279 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aphf03400
]
CVPH_0279 (mutM)
Enzymes [BR:
aphf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CVPH_0279 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CVPH_0279 (mutM)
DNA repair and recombination proteins [BR:
aphf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVPH_0279 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
MCR_D
Motif
Other DBs
NCBI-ProteinID:
BBB22414
UniProt:
A0A7U3V216
LinkDB
All DBs
Position
complement(272241..273050)
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AA seq
269 aa
AA seq
DB search
MPELPEVETTKRGLMPLIVNQKVNRVILHRENLRWAMPKHLITTLANQKINTIERRSKYL
LIRFKVGTLIIHLGMSGSIKVVNIETPLLKHEHFELQFNNGTNMRLNDPRRFGAVLFSKD
GSHKLLDSLGVEPLEASFNDGYLYQKSRNKQQNIKAFIMDSKIVVGVGNIYACESLFMAG
INPQRKAGSISKTRYNILTRCIKVILTQAIKAGGTTLQDFSQVDGNPGYFTQILSVYGCE
NKTCCLCKGKIIRIIQNQRSTFYCKKCQT
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttccagaagtcgaaactactaagcgtggacttatgcctttaattgttaat
caaaaagtgaatcgagtaatactgcatcgagaaaatttgcgttgggctatgcctaaacat
ttgataacaacattggctaatcaaaaaattaatacaattgagcgtcgtagtaaatactta
ttgattaggtttaaggtaggtacgttaattatccatttaggtatgagtggctcaattaag
gtggttaatattgaaacgccactactcaagcatgagcattttgaattgcaatttaataat
ggcacaaatatgcgcttgaatgacccaaggcgttttggtgcagtattattttcaaaagat
ggctcacacaaattactggattcattaggagttgaacctttggaggcatcatttaatgac
gggtatttatatcaaaaatcacgaaacaaacagcaaaacatcaaggcctttattatggat
agcaaaatcgtggttggtgtgggtaatatctatgcttgcgagagtttgtttatggcaggt
attaatccacaacgcaaggctggaagtatatctaagactcggtataatattttaactcgg
tgtattaaagtcatcttgactcaagctattaaggcaggtggcacaaccttgcaagatttt
tctcaagttgatggcaatcctggatatttcacccagattttgtctgtgtacggttgtgaa
aataagacatgctgtctttgcaagggtaaaataattagaattatacaaaaccaacgatcc
acattctattgtaaaaaatgtcagacttag
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