Abyssogena phaseoliformis symbiont: CVPH_0331
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Entry
CVPH_0331 CDS
T07717
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
aphf
Abyssogena phaseoliformis symbiont
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aphf03032
]
CVPH_0331
03036 Chromosome and associated proteins [BR:
aphf03036
]
CVPH_0331
03400 DNA repair and recombination proteins [BR:
aphf03400
]
CVPH_0331
DNA replication proteins [BR:
aphf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CVPH_0331
Chromosome and associated proteins [BR:
aphf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CVPH_0331
DNA repair and recombination proteins [BR:
aphf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CVPH_0331
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BBB22459
UniProt:
A0A7U3V245
LinkDB
All DBs
Position
334146..334421
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AA seq
91 aa
AA seq
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MNKSGLIDAISSAANLSKADASRALNATTDAITGAMASGDGVQLTGFGSFVVRDRAARTG
RNPQTGATIQIKASKVAAFKAGKALKEAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcaggattaatcgatgcaatttcatcagcagcaaacttatctaaagcagat
gcctctcgtgcattaaacgcaacaacagatgctattactggcgctatggctagtggtgat
ggtgtacaacttactggctttggtagttttgttgttagagaccgtgcagcgcgtacaggt
cgcaatccacaaacaggtgcaacgattcaaatcaaagcatcaaaagtggctgcttttaaa
gcaggaaaagcattaaaggaggcggttaataagtaa
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