KEGG   Abyssogena phaseoliformis symbiont: CVPH_0331
Entry
CVPH_0331         CDS       T07717                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
aphf  Abyssogena phaseoliformis symbiont
Brite
KEGG Orthology (KO) [BR:aphf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aphf03032]
    CVPH_0331
   03036 Chromosome and associated proteins [BR:aphf03036]
    CVPH_0331
   03400 DNA repair and recombination proteins [BR:aphf03400]
    CVPH_0331
DNA replication proteins [BR:aphf03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CVPH_0331
Chromosome and associated proteins [BR:aphf03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CVPH_0331
DNA repair and recombination proteins [BR:aphf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CVPH_0331
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: BBB22459
UniProt: A0A7U3V245
LinkDB
Position
334146..334421
AA seq 91 aa
MNKSGLIDAISSAANLSKADASRALNATTDAITGAMASGDGVQLTGFGSFVVRDRAARTG
RNPQTGATIQIKASKVAAFKAGKALKEAVNK
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaaatcaggattaatcgatgcaatttcatcagcagcaaacttatctaaagcagat
gcctctcgtgcattaaacgcaacaacagatgctattactggcgctatggctagtggtgat
ggtgtacaacttactggctttggtagttttgttgttagagaccgtgcagcgcgtacaggt
cgcaatccacaaacaggtgcaacgattcaaatcaaagcatcaaaagtggctgcttttaaa
gcaggaaaagcattaaaggaggcggttaataagtaa

DBGET integrated database retrieval system