Abyssogena phaseoliformis symbiont: CVPH_0355
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Entry
CVPH_0355 CDS
T07717
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf03030
DNA replication
aphf03430
Mismatch repair
aphf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVPH_0355
03430 Mismatch repair
CVPH_0355
03440 Homologous recombination
CVPH_0355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aphf03032
]
CVPH_0355
03400 DNA repair and recombination proteins [BR:
aphf03400
]
CVPH_0355
Enzymes [BR:
aphf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVPH_0355
DNA replication proteins [BR:
aphf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVPH_0355
DNA repair and recombination proteins [BR:
aphf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVPH_0355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BBB22478
LinkDB
All DBs
Position
complement(358516..359187)
Genome browser
AA seq
223 aa
AA seq
DB search
MERLIVLDTETTGIEPSEGHRIIEIGCTEIVDRQITENNEYHEYIQPSRNVGDSVRIHGI
TDKFLTDKPKFEAVVKTFLTYIEGATLIIHNAPFDLGFLNHELKLMGIDERIEDKCSIID
SLELSKQQRPGTLHNLDSLCRRFEIDSSARTVHGALLDAKILAQVYLAMTGGQSTLFGNE
QIANKQVNNTNNIIRVERAIGKIKVVYANERELAAHTSYFEKI
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggaaagactaattgtactagatactgagaccacgggcattgaaccttctgaaggtcat
cgcatcattgaaattggttgtacagaaattgtagacaggcaaatcactgaaaataatgaa
tatcatgagtacatacaacccagtcgtaatgttggcgattcagtacgaattcatggcatt
actgataaattcttaacagataagcctaaatttgaagccgttgttaaaacgtttttaacc
tatattgaaggcgcaacacttatcattcacaatgccccatttgaccttggttttctaaac
catgaacttaaacttatgggcattgatgagcgcattgaggataaatgtagcattattgat
tcattagaactctctaaacaacaacgacctggtacattgcacaatctcgattccttgtgc
cgacgatttgaaatcgactcaagtgcgagaactgtacatggcgcactactagatgcgaaa
attctagcacaagtttatctggcaatgactggtgggcaatctactttatttggcaatgaa
caaattgccaacaagcaagtcaataatactaataatattattcgagtagagcgtgctatt
ggcaaaatcaaagttgtttatgcaaatgaacgagaactggcagcgcatacaagttacttt
gaaaaaatttaa
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