Abyssogena phaseoliformis symbiont: CVPH_0356
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Entry
CVPH_0356 CDS
T07717
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CVPH_0356 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aphf03021
]
CVPH_0356 (rpoZ)
03400 DNA repair and recombination proteins [BR:
aphf03400
]
CVPH_0356 (rpoZ)
Enzymes [BR:
aphf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CVPH_0356 (rpoZ)
Transcription machinery [BR:
aphf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CVPH_0356 (rpoZ)
DNA repair and recombination proteins [BR:
aphf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CVPH_0356 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Tom37
Motif
Other DBs
NCBI-ProteinID:
BBB22479
LinkDB
All DBs
Position
359258..359590
Genome browser
AA seq
110 aa
AA seq
DB search
MARVTVEECLEHVENRFELVLVAAKRAHQLSSGGYKPLLDAGKDKPTVVALREIEAGLID
ASILSETHEIEEQLSAQQKVADSAKMSEIEDELSTAVVDKVTDKMTEIEQ
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagtaacagttgaagaatgtttagaacatgtagaaaatcgctttgagttagta
ttagttgcagcaaagcgtgcacatcaattaagttctggtggttataaaccactattagat
gcaggcaaagacaagccaacagtagtggcattaagagagattgaggcaggacttattgat
gcttcaattttaagcgaaactcatgaaatagaagagcaattatcagcacagcaaaaagtg
gcggatagcgcaaagatgtctgaaattgaagatgaactatcaacagcagtggttgataag
gttactgataagatgacagaaattgagcaataa
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