KEGG   Abyssogena phaseoliformis symbiont: CVPH_0393
Entry
CVPH_0393         CDS       T07717                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
aphf  Abyssogena phaseoliformis symbiont
Pathway
aphf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aphf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CVPH_0393 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aphf03400]
    CVPH_0393 (uvrB)
DNA repair and recombination proteins [BR:aphf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CVPH_0393 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CVPH_0393 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII DEAD UVR AAA_22 AAA_30 AAA_19 Kinesin Orbi_NS3 tRNA-synt_His
Other DBs
NCBI-ProteinID: BBB22499
LinkDB
Position
401986..403986
AA seq 666 aa
MRVDNRFQLISKFSPSGDQPEAIKTLVDGVNAGAKFQTLLGVTGSGKTFTLANVIQQTER
SSLIMAPNKTLAAQLYSEMKEFFPHNSVEYFVSYYDYYQPEAYVPASDTYIEKDSSINEQ
IEQMRLSATKALLERDDVIIIASVSAIYGLGNPESYMAMLLHLSIGEIINQREILSRLSQ
MQYSRNDITLMRGHFRVKGEVIDIFPADSEEQAIRIEMFDEEIEQLYWFDPLTGEKLKSL
QKITIYPQTHYVTPKSKILNMLDDIKVELKDRRSELLSVNKLVEEQRLTQRVHMDIEMMR
ELGYCTGIENYSRYLSSQNPGEPPSTLLDYLPDNALVILDESHVTVSQIGGMYKGDRARK
KTLVEFGFRLPSALDNRPLRFSEFEDRVHQCILVSATPAQYELEVSSVIAEQVVRPTGLL
DPEIDIRPVDTQVDDLLSEIRMRVKVNERVLVTTLTKKMSERLSDYLNDHHVKVRYLHSD
IDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTM
GRAARNINGHVILYAARITKSMQKAMDETKRRRVKQQDYNLKNNITPKGIAKPIINILDT
DLTSSQKKENGVQKVFTQLSPVQLAKEIKVLEKQMYSFASDLAFEHAADMRNQIKQLKDT
QFKKAL
NT seq 2001 nt   +upstreamnt  +downstreamnt
ttgcgtgtggacaatagatttcaactgatatcgaaattttcccctagtggtgatcagcca
gaagcgattaaaactttagttgatggcgtgaatgctggtgctaagtttcaaaccttgctt
ggcgtaactggatcgggtaaaacctttacactggctaatgttattcaacagaccgagcgc
tccagtttgattatggcgcccaataaaacattagcagcacaattatatagtgagatgaaa
gagttttttccacacaattcagtggaatattttgtttcttattatgactattatcagcca
gaagcttatgtacctgcttctgatacttatattgaaaaagattcttctattaatgaacaa
atcgagcaaatgcgtctatctgctaccaaggcactattagagcgtgatgatgtgattatt
attgccagtgtgtctgctatttatggcttgggaaatcctgaaagttatatggccatgttg
ctacatttgagtattggggaaattattaatcagcgcgagatactttcacgcttgtcacag
atgcaatactcgcgcaatgatattactttgatgcgtggccattttcgagttaagggtgaa
gtgattgatattttccctgctgattctgaagagcaagccatacgcattgaaatgtttgat
gaagaaattgaacaactttattggtttgaccctttaacaggggaaaaactaaaatcttta
caaaaaattaccatttatccacaaacgcactacgttaccccaaaatctaaaattttgaac
atgttggatgatattaaagtggagctaaaagatcgtagaagtgagttactatctgttaat
aaattggttgaagaacaacgcttaacacaacgcgtacacatggatattgaaatgatgcgc
gagttagggtattgcacaggtattgagaattactcacgctatttatccagtcaaaatcct
ggcgagccaccctcaacattgttggattatttgccagataatgcattggtaattttagat
gaatcacatgtgactgttagccaaattggtggcatgtataaaggtgatagggcgcgtaaa
aaaacgcttgttgagtttggttttcgcttaccaagtgctttggataatcgaccgcttaga
ttttcagaatttgaagacagagtccatcagtgtattttggtatctgccacgcctgcacaa
tatgagttggaagtttctagtgtgattgctgaacaagtagtaagaccaacaggattatta
gaccctgagattgacattcgtcctgtggatacgcaggtggatgatctacttagtgagata
cgaatgcgtgttaaagtgaatgagcgtgtattggtgacaactttgactaaaaaaatgagt
gagcggttaagtgattatctaaacgaccatcatgttaaagttcgttacttgcattctgat
attgatacggttgaaagggtggaaattattcgtgatttgcgcttaggcgtatttgatgtg
cttgttggtatcaacctattacgtgaaggcttggatattcccgaagtgtctttggtggct
attttagatgcagataaagaagggtttttacgctctgaacgctcgctgattcaaaccatg
gggcgagcggctagaaatataaatgggcacgtaattttatacgctgcccgcataaccaaa
tcgatgcaaaaggcgatggatgaaaccaaaagacgtcgggttaagcagcaggactataat
ctaaagaacaacatcacacccaaaggtattgccaaacctattatcaatatccttgatacg
gatttaaccagtagccagaaaaaagagaatggcgttcagaaagtgtttactcaactttca
ccagtacaattagcaaaagaaattaaagtgctagaaaagcaaatgtatagttttgctagc
gatttagcgtttgaacatgcggcagatatgcgtaatcagattaaacaactcaaggatact
caatttaaaaaagcattatga

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