Abyssogena phaseoliformis symbiont: CVPH_0468
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Entry
CVPH_0468 CDS
T07717
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVPH_0468 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aphf03032
]
CVPH_0468 (dnaB)
Enzymes [BR:
aphf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CVPH_0468 (dnaB)
DNA replication proteins [BR:
aphf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CVPH_0468 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
divDNAB
ATPase
nSTAND3
SlyX
NPHP3_N
KxDL
AAA_19
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BBB22547
LinkDB
All DBs
Position
complement(478954..480399)
Genome browser
AA seq
481 aa
AA seq
DB search
MDIKNAKIPPNSIESEQSVLGGLLLHNEAWDRVADILTEADFYNASHRIIFNAITVLLQH
DQPADILTVKEQVKKTGSEETIGGFVYLAQIAENTPSISNIEAYAKHVRELSVYRQLIIV
SHEIADTAYHPKEIEVQELIDLSEKKIFEISEQVTRGKQDITNVKDIIKDVVNRVHEMQE
SSGISGLETGFSELDKLTSGLQNGDLIIIAGRPSMGKTALSMNIIEHVAITAKDPKPVAV
FSLEMPTEQLVMRMISSFGHIEGSKLRNTMTETDWNSFNHAVLALEKSTVLIDETPSITP
TEIRAKCRRLKRQYPDLALIMVDYLQLMTVHGKSENRVQEISEISRSLKALAKEINVPVL
ALSQLNRAVESRPKAGKGRMPQMSDLRESGSIEQDADIIGFIYRDQQYHDDAYSNPEEVG
KADLKIAKHRNGATGLIKLAFIGEYARFEDLALDNQFHGMADERIDTAYTHNMANFDQEP
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaaaacgccaaaataccgcccaattcaatcgaatcagaacaatctgttttg
ggtggcttattattgcacaatgaagcatgggatcgtgttgcagatattttaactgaggca
gatttttacaacgcctcgcatagaattatttttaatgccatcaccgtcctattacagcac
gaccaacctgctgatattcttacagttaaagaacaggttaaaaaaacaggatctgaggag
accattggtggctttgtctatttagcccaaattgctgaaaacacgcccagtatttctaac
attgaagcttatgccaaacacgtacgtgaattatccgtttatcgtcaactgattattgtt
agtcacgaaattgctgacaccgcttaccacccaaaagaaattgaagttcaagagctcatt
gacctttctgagaaaaaaatatttgaaatttccgagcaggtgactcgtggaaaacaagac
attaccaatgtaaaagacattattaaagatgttgtcaatcgagtacacgaaatgcaagaa
tctagcggtataagtggcttagaaactggttttagcgaattagacaaattaacttctggc
ttacaaaatggcgatttaattatcatcgctggacgcccttctatgggtaaaaccgctctt
tcaatgaacattattgaacatgttgccattactgctaaagaccctaaaccagtcgcagta
tttagtttagagatgccaaccgaacaattagtaatgcgcatgatttcatcatttggccat
attgaaggctcaaaattacgcaacaccatgactgaaaccgactggaacagctttaatcat
gccgtgttagccttggaaaaatccactgttcttattgatgaaactccttccattacacca
accgaaattcgcgcaaaatgtcggcgactaaaacgccaatatcctgatttagcgctaatc
atggtagactacttacagttaatgactgtacatggaaaaagtgaaaacagggtgcaagaa
atctctgaaatttcccgttcactcaaagccttggccaaagaaattaacgtacccgtgctt
gctttgtcacaacttaaccgtgctgttgaatcacgccctaaggctggcaaaggtcgtatg
ccacaaatgtctgatttacgcgaatcaggctcaattgagcaagatgccgatattattggt
tttatctatcgcgaccagcaatatcatgatgacgcctattcaaacccagaagaagttggc
aaggcagatttaaaaattgccaagcataggaatggcgccactgggctaatcaaactagcc
ttcattggtgagtatgcacgatttgaagacttggctcttgacaatcaatttcacggcatg
gctgatgagcgaatagacacagcttatacacataatatggctaattttgaccaagagcct
ttttaa
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