Abyssogena phaseoliformis symbiont: CVPH_0586
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Entry
CVPH_0586 CDS
T07717
Symbol
ffh
Name
(GenBank) signal recognition particle, subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf02024
Quorum sensing
aphf03060
Protein export
aphf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CVPH_0586 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CVPH_0586 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVPH_0586 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aphf02044
]
CVPH_0586 (ffh)
Enzymes [BR:
aphf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CVPH_0586 (ffh)
Secretion system [BR:
aphf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CVPH_0586 (ffh)
Eukaryotic Sec-SRP protein
CVPH_0586 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
cobW
T2SSE
DO-GTPase1
ArsA_ATPase
AAA_14
AAA_31
YqeC
nSTAND3
AAA_30
KAP_NTPase
AAA_24
SLFN-g3_helicase
AAA_16
DnaB_C
ResIII
FtsK_SpoIIIE
AAA_33
DO-GTPase2
KTI12
ABC_tran
RelE
Motif
Other DBs
NCBI-ProteinID:
BBB22636
UniProt:
A0A7U3VTQ0
LinkDB
All DBs
Position
599344..600753
Genome browser
AA seq
469 aa
AA seq
DB search
MFDNLTERLQNSFKVLQGKNKLSESNIKEAIREVRRALLEADVALEVIKVFLDQVQTKVL
GLKVGQGLKPSQAFIKLVETELTEIIGGETELLDLKTQPPAIIMVAGLQGAGKTTSIAKL
ALYLKQRENKKVLVVSADVYRPAAIEQLEILAKQVEVDFFPSTIGDKPSDIVTSAKKHAQ
KQFFDVLLVDTAGRLHIDEQMMDEIKTLQNKVNPIETLFVVDSMTGQDAAHTAKAFADAL
PLTGVILTKTDGDARGGAALSVRHITGKPIKFLGIGEKIDALELFHPERVVSRLLGMGDV
LSLVEEISRKVDHKKAQKSVKKMAKDQFDLSDMRDQLLQMEQMGGMEALMDKLPGIMMGQ
IPQNVKNQIMGGAETKKMVAIINSMTPKERSHIKLIKGLRKARIANGSGTNVQAVNKLIK
QFEKMQKQMKKMGGGKMQKMMAKMAGADGMPDFSKMKLPNMDGGNKFPF
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgagcgtctacaaaatagttttaaagtcttacaaggaaaaaac
aaactatctgaatccaatattaaagaggcaattcgtgaagtgcgtcgtgcactacttgag
gctgatgttgcacttgaggtgattaaggtatttttagaccaagttcaaaccaaggtatta
gggcttaaagttggacaagggctaaaaccatcacaagcatttattaaactggttgaaact
gaattaactgagattattggtggtgagaccgaattgcttgatttaaaaacccagccgcca
gctattattatggtggcaggtttgcaaggtgcgggtaaaaccacctcaattgccaagctt
gcactttatttaaaacagcgtgaaaacaaaaaagtattagtagtcagtgctgatgtttat
cgtcctgctgctattgaacaattagaaatattagccaagcaagttgaggtggattttttc
ccatcaacaattggtgacaagccttcagatattgttactagtgctaaaaagcacgcacaa
aaacaattttttgatgttttattggttgataccgcaggtcgtttgcatatagatgagcaa
atgatggatgaaattaaaaccttacagaataaagtcaacccaattgaaactttgtttgtg
gttgattctatgacgggtcaggatgcggcgcatactgccaaagcatttgctgatgcattg
ccattaacaggggttattcttaccaaaactgatggtgatgctagaggtggtgcggcattg
tctgtgcgtcatattacgggcaagccgattaagtttttaggtattggtgagaaaattgat
gccttggagctattccatccagagcgtgtggtttcaaggcttttgggtatgggcgatgta
ctttcattggtagaagaaatttcacgtaaggttgatcataaaaaagcgcaaaagtccgtc
aaaaaaatggctaaagatcaatttgatttatccgatatgcgtgaccaacttttgcaaatg
gagcaaatgggtggtatggaagcattgatggacaaactgccaggtattatgatgggtcaa
attccacaaaatgttaaaaatcaaatcatgggtggggctgaaaccaagaaaatggttgcc
attattaattcgatgacacctaaagagcgtagccacattaagctcattaaaggtttgcgc
aaggcgcgtattgctaatggctctggtacgaacgtccaagcagttaacaaactcatcaag
cagtttgaaaaaatgcaaaaacaaatgaaaaaaatgggcggtgggaagatgcaaaaaatg
atggctaaaatggcaggcgctgatggtatgcctgatttctctaagatgaaattgcctaat
atggatggcggtaataagtttcctttttaa
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