Abyssogena phaseoliformis symbiont: CVPH_0601
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Entry
CVPH_0601 CDS
T07717
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
aphf
Abyssogena phaseoliformis symbiont
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aphf03032
]
CVPH_0601 (ihfB)
03036 Chromosome and associated proteins [BR:
aphf03036
]
CVPH_0601 (ihfB)
03400 DNA repair and recombination proteins [BR:
aphf03400
]
CVPH_0601 (ihfB)
DNA replication proteins [BR:
aphf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CVPH_0601 (ihfB)
Chromosome and associated proteins [BR:
aphf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CVPH_0601 (ihfB)
DNA repair and recombination proteins [BR:
aphf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CVPH_0601 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
BBB22650
UniProt:
A0A7U3VTI6
LinkDB
All DBs
Position
615601..615879
Genome browser
AA seq
92 aa
AA seq
DB search
MKKTDLILNLSDSSDLSKIDAKIAVEVILQELTQGIISGQGVEIRGFGGFYKKHRKARQG
INPKTSERTQVDEKFVPFFKPGKLLKEIVNKA
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaccgaccttattttaaatttatcagacagttctgatttatctaaaattgat
gccaaaatagcggttgaggtaattttgcaagaattaacgcaaggcattatttctggtcaa
ggtgttgaaataagaggttttggaggtttttacaagaaacaccgtaaggctcgtcagggt
attaaccctaaaactagcgaaaggacacaagtagatgagaagtttgtaccattttttaag
ccaggtaaattacttaaagaaatcgttaataaagcctag
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