Abyssogena phaseoliformis symbiont: CVPH_0638
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Entry
CVPH_0638 CDS
T07717
Symbol
rpoH
Name
(GenBank) DNA-directed RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
aphf
Abyssogena phaseoliformis symbiont
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aphf03021
]
CVPH_0638 (rpoH)
Transcription machinery [BR:
aphf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVPH_0638 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
SpoIIID
UCR_14kD
SWC7
HTH_3
Sua5_C
Motif
Other DBs
NCBI-ProteinID:
BBB22681
UniProt:
A0A7U3VTR7
LinkDB
All DBs
Position
complement(650628..651470)
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AA seq
280 aa
AA seq
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MSQEFALSPAKKTSSLEVQKYPPILSSEQEHELAVQLYENHDLSAARKLVLSHMRFVAFI
AHGYKGYGLEQADLVQEGTIGLMKAVKRFNPNKNVRLASFAVYWIRAEIHEFIFKNWKIV
KVATTKAQRKLFFKLKQAKAHIYSSLNEEQADKIANDLGVRRKDVLEMESRLQFNDVTFE
ISNDEDSHAPEQYLTNENVQTPEQLLLIDDSKQNQQQQLYKALSSLDERSLDILQSRYLK
EEKTTLHTLADKYGISKERVRQLETKAMQKLKSNLQEQTL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaatttgcattatcgcctgctaaaaaaacctcaagtctagaggttcaaaaa
tatccgcccatcctaagtagtgaacaagagcatgaattagccgttcaattgtatgaaaat
cacgatttaagtgcggccagaaaattggttttgtcgcacatgcgttttgtcgcctttatt
gcccatggctacaaaggttacggtcttgaacaagccgatcttgtgcaagaaggcaccatt
gggttaatgaaggcagttaagcgttttaacccaaataaaaatgtgcgcctcgcctcattc
gcagtatattggattcgtgctgaaattcacgaatttattttcaaaaattggaaaattgtt
aaggttgccacaaccaaggcgcaacgtaaattatttttcaaactcaagcaagctaaagca
catatttacagctcattaaacgaggaacaagcagataaaattgccaatgatttaggcgtg
cgtcgtaaagatgtactggagatggagtcgcgcttgcaatttaacgatgtgacgtttgaa
atatctaatgatgaggattctcatgcaccagaacaatacttaaccaatgaaaacgtccaa
acacctgagcagttgttactaatagacgattcaaagcagaaccaacagcaacaactttac
aaagccttgtcgtcgttagatgaaagaagtttggatattttacaatctagatacttgaaa
gaagaaaaaacaaccctacatactttagcagacaagtatggtatctcaaaagaaagagtg
cgccaacttgaaaccaaagccatgcaaaagcttaaatcaaatttacaagagcaaactctt
taa
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