Abyssogena phaseoliformis symbiont: CVPH_0759
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Entry
CVPH_0759 CDS
T07717
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVPH_0759 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aphf03019
]
CVPH_0759 (pcnB)
Enzymes [BR:
aphf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CVPH_0759 (pcnB)
Messenger RNA biogenesis [BR:
aphf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CVPH_0759 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BBB22779
UniProt:
A0A7U3V2M3
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All DBs
Position
complement(772189..773328)
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AA seq
379 aa
AA seq
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MKAIRQSIKFDKKLLDKDALKVISIIDKAGFKAYLVGGCIRDLLLNLEPKDFDIATNAKP
EQVHKLFKRSRLIGRRFCLVHVMFSACKFIEVATFRSGKVKTAKNGVGVRDNCYGNIEDD
VVRRDFNINALYYDIKTQEVIDYVGGLEDIKAQEVHIIGNPKLRFEQDPVRMIRAIRFQT
KLGFQLSNEIKLAIFEQAPLLGNISAARLYEECIKLFHNEYGFEVYERLEKYGLLKYLFK
QTHKNEFIKKALLNTSDRIKKNQSVTPVFLFAVFLWQAYNERFIVLENKQSCSSLAMTQA
SEEVIINQIKQVSLPRWLNTRIKDIWLMQPRLEKMQAKKVKALLSNPRFRMAYDFLLLRS
ISINPELAEVAKFWTKAQQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccattcgtcaaagcattaagtttgataaaaaacttctagataaagatgcttta
aaagttattagtattattgataaagcagggtttaaagcctatctagtaggtggttgcatt
agagatttactcttaaatttagaaccaaaagattttgatattgcaaccaatgccaaacca
gagcaagtgcataaattattcaaacgctcacgtttaataggtaggcgtttttgtttagtg
cacgttatgttttcagcatgtaaatttattgaagtggctacttttaggtcaggtaaggtg
aaaaccgctaaaaacggcgttggtgttcgtgataattgctatggtaatattgaagatgat
gttgtgcgtagggattttaatattaatgcgctttattatgatattaaaacgcaagaagtc
attgattatgtgggtggacttgaagatataaaggcgcaagaagtgcatattattggcaat
ccaaaattaagatttgagcaagacccagtgcgcatgattagagccattaggtttcaaact
aaattagggtttcaattaagtaatgagattaaattggctatttttgaacaagcaccactt
cttggtaatatttctgcagcgcgtttgtatgaagagtgtattaaattgttccacaatgaa
tatgggtttgaagtgtatgagcgcttagaaaaatatggtttattaaaatatttgtttaaa
caaactcataaaaatgaatttattaaaaaggccttgttaaacacctcggacagaattaaa
aaaaatcaatctgtcacgcctgtgtttttatttgctgtgtttttatggcaagcttataac
gagcgttttattgtacttgaaaacaagcaaagttgttcgtctttagcaatgactcaggcc
tctgaagaggtgattattaatcaaattaagcaagtctcgctacccagatggttaaacact
agaattaaggatatttggctaatgcaaccaagactagaaaaaatgcaagcaaaaaaagtc
aaagcattactaagtaatccacgttttagaatggcatatgatttcttattattgcgctct
ataagtatcaatccagaattggctgaagtggctaaattttggaccaaggctcaacagtga
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