Abyssogena phaseoliformis symbiont: CVPH_0794
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Entry
CVPH_0794 CDS
T07717
Symbol
msbA
Name
(GenBank) ATP-binding cassette, subfamily B, bacterial MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CVPH_0794 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aphf02000
]
CVPH_0794 (msbA)
Enzymes [BR:
aphf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CVPH_0794 (msbA)
Transporters [BR:
aphf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CVPH_0794 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_15
AAA_22
ABC_ATPase
AAA_16
DUF2291
AAA_29
RsgA_GTPase
SRP54
AAA_7
MMR_HSR1
TsaE
Dala_Dala_lig_N
AAA_25
ResIII
AAA_21
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BBB22805
UniProt:
A0A7U3V2C9
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All DBs
Position
810966..812687
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AA seq
573 aa
AA seq
DB search
MQYKQFTSHLFIYLKPHVGKLVFTSVMMMLATVLESSVPEITGRIVDELFVTEHESKTAF
IYAFALFGIVVLSSLFTLTSTAVSSWVSNKVIMDLRVTMFAKLLKLPKSYFDQHPTGKTL
SKLTFDVEQIAASASTIWLDFIKSSITVVILIGYLFYKNWQLSLTLLVLLPLVYLAVKLS
SNRMRRSSVNVQKSMGNMTHLLNENISGNTLVKIYHAQSQISKKFNSLIKNIRQQRFKVD
MTSSSNTAFVNVLIGLSLSSVVYFSSTSLQMSAGEFLSFFTAMGMLLKPAKNLVNINKPL
QNAMAAGESVFGLINEKEESNVGTKKLKKPKGAIQFNDVSFAYNNNTTVLKRINLDIKPG
ETIAFVGATGSGKTTIIQLLMRFYSPKQGSITIDGIDINQFEIDSLRSNIAFVDQNMQLF
NDSIRGNIALGQLDTMPDKQIKRSAIAANADEFIQQLEHGFDTQIGENGAKLSGGQRQRL
AIARAIAKDSPILILDEATSALDSATEKQVQNAIHEMQKDRTTIVIAHRLSTIQKADLII
VLRHGSIIEQGTHQKLLDHQGEYSQLYKHQFED
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacaaacaattcacctctcatttatttatttatttgaagccacacgttggcaaa
cttgtctttacttcagtcatgatgatgttggcaacagtgcttgagagctcggtgccagaa
atcacaggtagaattgttgatgaattatttgtaactgaacatgaatcaaaaactgcgttt
atttatgcttttgctttgtttggtattgttgttcttagttcgttgtttacgcttacttct
actgcggttagttcttgggtgtctaataaagtgattatggatttacgcgttaccatgttt
gctaaattgttgaaattacctaagtcgtattttgatcaacatcctacgggaaaaacatta
tctaaactcacttttgatgttgagcaaattgcagccagtgcctcaaccatttggctggat
tttattaaatcatcaataactgttgttatcctaattggctatttattttataaaaactgg
caactgagtttaacgctattagtgctcctaccactggtgtatttagccgttaaactctcc
tctaatcgtatgcgtcgttcaagtgttaatgtgcagaaatcaatgggtaatatgacgcac
ttacttaatgaaaatatttctggcaacaccttggttaaaatttatcacgcccaatctcaa
ataagtaaaaagtttaacagcttgattaaaaatatccgtcaacaacgttttaaagttgat
atgaccagtagttctaataccgcttttgttaatgttttaattggactatctctaagtagt
gtggtgtatttttcctctacttcactacaaatgagtgcaggtgaatttttgtcttttttt
acggcaatgggcatgctacttaaacctgccaaaaatttagtcaatatcaacaaacctttg
caaaatgcgatggcagcgggtgaaagtgtgtttggacttattaacgaaaaggaagaatct
aatgttggtactaaaaaactaaaaaaacctaaaggtgccattcaatttaacgacgtatca
tttgcttataacaataatacgaccgtgcttaaacgtatcaatctagacattaaaccaggt
gaaacaattgcatttgttggtgcaacaggtagtggtaaaaccactattattcaattattg
atgcgcttttattcgccaaaacaaggttctatcactattgatggtatagatattaaccaa
tttgaaattgattcattacgctcaaatattgcctttgttgatcaaaatatgcaactattt
aatgactctattagaggcaatattgccttgggacaactagacaccatgccagataaacag
atcaaacgttcagcaattgctgccaatgctgatgaatttattcaacaactagaacatgga
tttgatacgcaaattggcgaaaatggcgccaagctttcaggcggacaacgccaacgactt
gctattgcaagggcgattgctaaagacagccctattttaattttagacgaagccacctca
gcattagacagtgctactgaaaaacaggtgcaaaacgcaattcatgaaatgcaaaaagac
agaaccactattgttattgcccatcgattaagcaccattcaaaaggccgacctcattatc
gtactgcgccatggtagtatcattgaacaaggtactcatcaaaaactgttagaccatcaa
ggcgaatattcccaattgtataaacaccaatttgaggattaa
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