Abyssogena phaseoliformis symbiont: CVPH_0966
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Entry
CVPH_0966 CDS
T07717
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf00550
Peptidoglycan biosynthesis
aphf01100
Metabolic pathways
aphf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CVPH_0966 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CVPH_0966 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aphf01011
]
CVPH_0966 (mrdA)
Enzymes [BR:
aphf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CVPH_0966 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
aphf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CVPH_0966 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF4350_C
LBP_M
ULD_2
Motif
Other DBs
NCBI-ProteinID:
BBB22926
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All DBs
Position
971929..973806
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AA seq
625 aa
AA seq
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MASRSVFIIKMQSINNTQFENKALFSRLRLALIFIFLLTTLLMVTIYNLQIVNHEYYLEE
ALGNQMRTLPITPSRGKIFDRHGNVLATNKLAFRLTLTQEKTKNIAKTLQQLKQSGFIND
NDIKSFNKNARRYQKFHSIPIKYNLNETQVAKFLISNAFIGVNIEPYFHRIYPNQDSGVH
VIGYVSRMTKKDKLFYDKKNYSGTLFVGKTGIEKQYETRLHGTNGLQQIERNVSGKVIDT
QVIKPAIAGENLYLSIDLDMQKKAETLLQGKRGSIVVINVRNGEILTLVSMPIYNPNWFV
NGISHTNYNQLQTSTNIPQLNRAVQGLYPPGSTIKPMVALAGLEENIITNKSSAFCPGYY
KLPNVKRKFNDWKKTGHGHVNVKDSIAQSCDVFFYDLADKLGIDKLHDNLDLFNFGRKTG
IDIPGESAGVLPSKTWKKINKNEPWYRGETLITGIGQGFMAVTPLQLAVATAAIANKGLL
FQPTLLKNTQVPGNIIIKSKKGHHVQIPIKNIQNWEDVIDGMKQAIYSPKGTARRLNKGL
TYTLAGKTGTAQVFGLDTEEQYIAEKLDEKLRDHALFTGFAPIENPEIAIAIIVENAGNG
SSKAAPIARQVLDVYFDKQLNNTSP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
ttggccagtcgttcggtttttattatcaaaatgcaaagcataaacaatactcaatttgaa
aacaaagcgctcttttctaggctgaggttggcgcttatttttatttttttactaactact
ttgttaatggttacaatttacaatttacaaatagtaaatcatgaatattacttagaagaa
gctttgggcaaccaaatgcgcactctacccataacacctagtagaggaaaaatatttgat
cgccatggtaatgttttagccactaataagttagcatttcggttgaccttaacacaagaa
aaaactaaaaatattgctaaaacactacaacaactcaaacaatctggctttatcaacgat
aatgacatcaaaagctttaataaaaatgcaaggcgttatcaaaaatttcatagcatccca
atcaaatataatcttaatgagacccaggttgcaaaattcttaattagcaatgcttttatt
ggtgtaaatatagaaccttattttcatcgaatttatcctaaccaggattccggcgttcat
gtcattggttatgtttcaagaatgactaagaaagacaagcttttttatgataagaaaaac
tattcaggaaccttatttgtaggcaaaaccggcattgaaaaacaatacgaaacacgattg
catggcactaatggcttacaacaaattgaacgaaatgtaagtggcaaagttatcgacacc
caagttattaaacctgctattgctggtgaaaatttatatttaagcattgacttagatatg
caaaaaaaagcagaaacattacttcaaggtaaacgtggttcaattgtagttataaatgtc
agaaatggggaaatattaacgctagttagtatgcccatctataatccaaactggtttgtt
aatggcatatcacatactaactataaccagttacaaacttcaacaaacatccctcagctt
aaccgcgccgttcaagggttatatccaccagggtctacaattaaacccatggtggctcta
gcaggcttggaagaaaatattattactaataaaagtagcgccttctgcccaggttattac
aaattacccaacgttaaacgcaaatttaacgactggaaaaaaacagggcatggacacgta
aatgtcaaagactcaatcgcgcaatcgtgtgatgtatttttctatgatttggcagataaa
ctgggtattgacaaattacacgataatttagacttatttaattttggccgaaaaacaggc
attgatattcccggagaaagcgctggcgttctaccctctaaaacttggaaaaaaattaat
aaaaatgagccttggtatcgaggagagaccttaattacaggcattggtcaaggatttatg
gctgttactcccttgcagcttgcagttgccacagcagcgattgccaacaaggggcttttg
tttcagccaaccttacttaaaaatacgcaggtgcctggcaatataattattaaatctaag
aaagggcatcatgtacaaattccaattaaaaatattcaaaattgggaagatgtgattgac
ggtatgaaacaagctatttacagccctaaaggcactgctagaagactcaataaaggttta
acttatacattggctggaaaaactggtactgcacaagtgtttggtcttgacactgaagag
caatatattgcagaaaaacttgatgaaaaattaagggatcatgctttatttactggcttt
gcccctattgagaatccagaaatagccatcgctattattgttgaaaatgcaggcaatggc
agttcaaaagcagcaccaattgcacgtcaagtgcttgatgtatattttgacaagcaacta
aacaatacttcgccttaa
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