Abyssogena phaseoliformis symbiont: CVPH_1036
Help
Entry
CVPH_1036 CDS
T07717
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf00541
Biosynthesis of various nucleotide sugars
aphf01100
Metabolic pathways
aphf01250
Biosynthesis of nucleotide sugars
Module
aphf_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CVPH_1036 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aphf01005
]
CVPH_1036 (kdsB)
Enzymes [BR:
aphf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
CVPH_1036 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
aphf01005
]
Lipid A
CVPH_1036 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
Glyco_tranf_2_3
IspD
Motif
Other DBs
NCBI-ProteinID:
BBB22976
UniProt:
A0A7U3V2M5
LinkDB
All DBs
Position
complement(1041417..1042151)
Genome browser
AA seq
244 aa
AA seq
DB search
MDFSVIIPARYASSRLPAKLLKDIHGKPLIQLTYENVINSGANRVIIATDDKRIEAVAND
FGALTCMTDEYHTSGTSRIAQVLEVLDIDDDEIIVNVQGDEPMLNPSVIDQVANNLETSP
MQMATLCEQITNKAQYFDPNCVKVVFDKVGKALYFSRAAIPFFREAKDFDLKLCFKHVGI
YAYRARFIKQYLTMDSSSYEQVEKLEQLIVLNEGFDIHVALVCASIGHSVDTQRDLDKVR
KELS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctgttattatccctgctaggtatgcatcaagcagattgccagccaaacta
cttaaagatattcatggcaagcctttgattcaattaacttatgaaaatgtaatcaatagt
ggtgcaaatcgtgtcattattgcaactgatgataagcgcattgaggcagttgctaatgat
tttggagctttaacttgcatgactgacgaatatcatacttctggcacttcaagaattgca
caagtgttggaggtattagacattgatgatgatgaaattatcgttaatgtgcagggtgat
gagccaatgctaaacccaagtgtgatcgaccaagtggctaataacttagaaaccagtcct
atgcaaatggcaactttgtgtgagcaaattactaataaggcgcaatattttgaccctaat
tgcgttaaagtggtttttgataaagttggcaaggctttgtatttttcacgcgccgccatt
cctttttttagagaagcaaaggattttgatttaaaattgtgttttaaacacgttggtata
tacgcttatcgagcaagatttatcaaacaatacttaaccatggacagttcttcatatgag
caagttgaaaaattggaacaattaatcgtgcttaacgaagggtttgatattcatgtggcg
ttggtttgcgctagcattggacatagtgttgatacgcaacgtgatttagataaagtaaga
aaagagttgagctga
DBGET
integrated database retrieval system
