Abyssogena phaseoliformis symbiont: CVPH_1172
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Entry
CVPH_1172 CDS
T07717
Symbol
lpdA
Name
(GenBank) pyruvate dehydrogenase complex E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf00010
Glycolysis / Gluconeogenesis
aphf00020
Citrate cycle (TCA cycle)
aphf00260
Glycine, serine and threonine metabolism
aphf00280
Valine, leucine and isoleucine degradation
aphf00310
Lysine degradation
aphf00620
Pyruvate metabolism
aphf00630
Glyoxylate and dicarboxylate metabolism
aphf00640
Propanoate metabolism
aphf00670
One carbon pool by folate
aphf00785
Lipoic acid metabolism
aphf01100
Metabolic pathways
aphf01110
Biosynthesis of secondary metabolites
aphf01120
Microbial metabolism in diverse environments
aphf01200
Carbon metabolism
aphf01210
2-Oxocarboxylic acid metabolism
aphf01240
Biosynthesis of cofactors
Module
aphf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
aphf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CVPH_1172 (lpdA)
00020 Citrate cycle (TCA cycle)
CVPH_1172 (lpdA)
00620 Pyruvate metabolism
CVPH_1172 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CVPH_1172 (lpdA)
00640 Propanoate metabolism
CVPH_1172 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CVPH_1172 (lpdA)
00280 Valine, leucine and isoleucine degradation
CVPH_1172 (lpdA)
00310 Lysine degradation
CVPH_1172 (lpdA)
00380 Tryptophan metabolism
CVPH_1172 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CVPH_1172 (lpdA)
00670 One carbon pool by folate
CVPH_1172 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aphf04147
]
CVPH_1172 (lpdA)
Enzymes [BR:
aphf01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CVPH_1172 (lpdA)
Exosome [BR:
aphf04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CVPH_1172 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
NAD_binding_8
GIDA
HI0933_like
FAD_binding_2
AlaDh_PNT_C
FAD_binding_3
DAO
3HCDH_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
BBB23089
UniProt:
A0A7U3V3B3
LinkDB
All DBs
Position
1163093..1164502
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AA seq
469 aa
AA seq
DB search
MIIKTQVVVIGSGPGGYTAAFRAADLGKQVTLIERYDVLGGVCLNVGCIPSKVLLHTAQI
INEVKEASHLGVTFNEPDININDVRTNKINIVAKLTGGIKALAKARKVDVITGYGKFISA
NQLAIEHSDDIIEFEQCIIAVGSCVTKIPAFPFDDARVMDSTDALDLTNIPKRLLVVGGG
IIGLEMATIYHALGSEISIVELSDQLITSADKDIVNPLFRRIKKQYANIFLNTKVTSMDA
LDEGIKVGFEGKNAPEFDTFDKVLVAIGRTPNGELIDCEKAGVEVNDWGFIPTDKQMKTN
VQNIYAIGDIVGQPMLAHKAVHEAKVAAEVICGHKSGFDALTIPSVAYTDPEVAWTGKTE
KELKAEGIAYEKGIFPWAASGRSLSIGRSEGMTKGLFDAKTGRILGMGICGTNAGELIAE
ATLAIEMGCDMDDIALTIHAHPTLSETTAFATEMAQGTITDLLPPKKKK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgattataaaaactcaagttgttgtgattggttctggtcctggtggttacacagctgca
tttcgagcggctgatttaggcaaacaagtgacgctaattgaacgttatgatgttttaggt
ggagtctgcctaaatgttggctgcatcccttctaaagtacttcttcatacagctcaaatc
atcaacgaggtaaaagaggcctctcatttaggtgttacattcaatgaaccagacattaac
attaatgacgtacgcacaaataaaatcaacattgtcgccaaattaacaggaggcattaaa
gctttggcaaaggcaagaaaggttgatgttataacgggctatggtaagttcatctcagcc
aatcaacttgcaatcgaacatagcgacgatatcattgaatttgaacaatgtattatcgct
gtaggttcatgcgttaccaaaattcccgcctttccatttgatgatgctcgcgtgatggat
tcaacagatgcactagatttaaccaacatacccaaacgcttgcttgttgttggtggtggt
attatcggcctagaaatggcaacgatatatcacgcactgggtagtgaaatatcaattgtt
gaattatcagaccaactcattaccagtgccgacaaagacattgtcaacccactttttaga
cgcattaaaaaacaatacgctaatatttttctaaacaccaaagtaaccagcatggacgca
ctagatgaaggcattaaagttggttttgaaggcaaaaacgccccagaatttgacaccttt
gataaagtgttagtcgccattggtcgcactcctaatggcgaattaatcgattgcgaaaaa
gcaggtgttgaagtcaacgattggggttttattcccacagacaaacaaatgaagaccaac
gttcaaaacatctacgccatcggcgatattgttggtcaacccatgctcgcccacaaagcc
gtacacgaggccaaagttgcagcagaagttatttgtgggcataaatcaggctttgatgcg
ctcaccatcccatccgttgcctacaccgacccagaagtcgcttggacaggcaaaaccgaa
aaagaactcaaagctgaaggcattgcttatgaaaaaggcatattcccttgggcagcttca
ggccgtagtttaagtattggcaggtctgaaggcatgaccaaaggcttgtttgatgcaaaa
acaggtagaatcttaggcatgggtatttgtggcactaatgcaggtgagttaattgctgaa
gcaacacttgccattgaaatgggttgcgatatggatgatatcgcactcaccatccatgct
cacccaaccttaagtgaaaccaccgcctttgcaactgaaatggcacagggtacaattaca
gatttattaccgccgaaaaagaaaaaatag
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