Abyssogena phaseoliformis symbiont: CVPH_1206
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Entry
CVPH_1206 CDS
T07717
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aphf03016
]
CVPH_1206 (truA)
Enzymes [BR:
aphf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CVPH_1206 (truA)
Transfer RNA biogenesis [BR:
aphf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CVPH_1206 (truA)
Prokaryotic type
CVPH_1206 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3969
Motif
Other DBs
NCBI-ProteinID:
BBB23111
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All DBs
Position
1193380..1194123
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AA seq
247 aa
AA seq
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MKIALGVEYLGTNFHGWQCQKSNIRTVQHVVEQALSSVASHPVRVFCSGRTDAGVHATCQ
VIHFETSVKREDKAWLFGGNVNLPSDVNFTWAKHVDDNFHARFSATARQYNYKIHNTKVR
SALIATHSLWEPRKLDIMAMDKASKYLTSEHDFSAFRGSLCQEKSPIKTIEFIKLAKSAD
NILLDIKANAFLHHMVRNIVGTLLKVGKGEKSIEWVKEVLDSKQRKQAGPTAPPQGLYFI
KAFYSNL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcattaggcgttgagtacttaggcacaaacttccatggctggcagtgtcaa
aaatctaacattcgcactgtacagcacgtagttgagcaagccctatcaagcgttgccagt
catcccgttagggtgttttgttctggtagaaccgatgctggcgtacacgccacctgccaa
gttattcactttgaaaccagcgttaaacgcgaagataaggcttggctatttggtggcaat
gttaatctgccaagcgatgtcaattttacttgggcaaaacacgttgatgataatttccac
gcacgatttagtgccactgctagacaatacaactataaaatacacaacacaaaagttcgc
tctgccctcatagcgacccactcattatgggagccaagaaaattggacataatggcaatg
gataaagccagcaaatatttaactagcgaacatgacttttcagccttccgaggtagttta
tgtcaagaaaaatctcccattaaaaccattgaatttataaaactagctaagtctgctgac
aacattttactagacataaaagccaacgcctttttacaccacatggtacgcaatattgtt
ggtacactgctcaaagtaggtaaaggcgaaaaatccattgaatgggtcaaagaggtgctg
gacagcaagcaacgcaagcaagccggccctactgcaccaccccaagggctttattttatt
aaagccttttactctaatttataa
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