Abyssogena phaseoliformis symbiont: CVPH_1247
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Entry
CVPH_1247 CDS
T07717
Symbol
rpsC
Name
(GenBank) small subunit ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
aphf
Abyssogena phaseoliformis symbiont
Pathway
aphf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CVPH_1247 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
aphf03011
]
CVPH_1247 (rpsC)
Ribosome [BR:
aphf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CVPH_1247 (rpsC)
Bacteria
CVPH_1247 (rpsC)
Archaea
CVPH_1247 (rpsC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
KH_KhpA-B
KH_NusA_2nd
WHD_SSO1393
Motif
Other DBs
NCBI-ProteinID:
BBB23144
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All DBs
Position
complement(1222868..1223560)
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AA seq
230 aa
AA seq
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MGQKVNPKGIRLGIVKDWDSKWYANSQDYSKYLLSDIEVRDYLFDKLTNASVSRIQIERL
ANNAKVTIHTARPGIVIGKKGADIERLKSIVSKMMGIPVHINIEEIKKPELDARLVAENI
AQQLEKRVMYRRAVKRVLGNATRLGAQGIKVMVSGRLNGAEIARSEWYREGRVPLHTFRA
DVDYSSYGANTQYGVIGIKVWIFKGEILDHKKGTLDEVARRGATNQIAKK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaaagtaaatccaaaaggtattagattaggtattgtcaaagattgggattct
aaatggtatgccaatagtcaagactattctaagtatttattatctgatattgaagttaga
gattatctgttcgataaactaacaaatgcttctgttagtcgcattcaaatcgagcgtttg
gcaaataatgccaaggttactattcatacagcacgtccaggcattgttattggcaagaaa
ggtgctgatattgaacggttaaagtcaattgtttcaaaaatgatgggcattcctgttcat
attaacattgaagaaattaaaaaacctgaacttgatgcgcgtttggtggctgaaaatatt
gcccaacaattagaaaaacgtgtgatgtatcgtcgtgctgttaagcgtgtgctaggcaat
gcaactcgtttgggtgctcaaggtattaaagtgatggtcagtggccgtttaaatggtgca
gaaattgcgcgttctgagtggtatcgtgaaggccgagtgccattgcatacttttagagcc
gatgttgattactcttcttatggtgcaaacacacaatacggtgttattggtattaaggtt
tggattttcaagggtgagattttagatcacaaaaaaggcacactagatgaggttgctcgt
cgtggtgcaacgaatcaaattgccaagaagtaa
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