Abyssogena phaseoliformis symbiont: CVPH_1501
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Entry
CVPH_1501 CDS
T07717
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aphf03032
]
CVPH_1501 (topA)
03400 DNA repair and recombination proteins [BR:
aphf03400
]
CVPH_1501 (topA)
Enzymes [BR:
aphf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CVPH_1501 (topA)
DNA replication proteins [BR:
aphf03032
]
Prokaryotic type
DNA Topoisomerases
CVPH_1501 (topA)
DNA repair and recombination proteins [BR:
aphf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CVPH_1501 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BBB23331
UniProt:
A0A7R6P6E2
LinkDB
All DBs
Position
complement(1472998..1475361)
Genome browser
AA seq
787 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFSVKSSIGHIRDMPKKNMGIDIENNFTPTYEITTDK
KKVVADLCKAVKVAEKVYLATDEDREGEAIAWHLLEALNLPKDTPRIVFHEITKSAITNA
IVKPRTVDYQLVDAQQARRVIDRLVGFEISPVLWRKISGARSAGRVQSPVMRLVVERERE
ISQHITNSTYKVKAELVSGGGKVFEVKLSKEFESKEQALAFANALLSANLTVASTDKKSS
KRSSKPPFITSTLQQEASQKLGFSVKQTMTLAQNLYREGSITYMRTDSFTLSETTIEAAG
QVIAKGFGSDYHHIRRYKTKDTGAQEAHEAIRPTDLTKPSIFGIEDQAAKLYSLIYKRTL
ACQMSDAQLQKTQIKINISGLDEKFIANGEILTFPGFLRVYDYLSSENKLLPDLNKGDAL
GLASFKARESFSRAKPRYTEASLVKKIEEMGIGRPSTFATMVSTVQDRNYVTKETREGVE
RAYQLVEIKDNQVIQSQPNEVTGAEKNKLFPTNVAYLLTDFLVKYFDNIIDYKFTAKLES
DFDTIATQNVPWQGVVKNFYTPFHQKIEDAADISREETHGMRELGTDPKSGKPVSVRFGR
YGAFAQIGHKDDEDKPAFASLRGSLDIESIALDEALELFNMPRTVGETDNFGTIKANYGR
FGPYIQYGKKYASLKEDTPEEVSLEKALELIKAKEKFDAERIIKTFDDSDIQVLNGRFGP
YIWNGKKKGKGQKNITIKKVFGDKAPADLTLEECKKAVAGKIKAKVKPKKKIVKKKVTIK
VDPVPSI
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatcttgttattgttgagtcccctgccaaagccaaaaccattgaaaagttt
ttaggtaaggactttagcgttaaatctagtatcggtcacatccgtgatatgcctaagaaa
aacatgggtattgacattgaaaacaattttacccccacctatgaaattaccacagataag
aaaaaagtagtcgctgatttgtgcaaggccgtaaaagtcgcagaaaaagtctaccttgca
acggacgaggatcgcgaaggtgaagctattgcttggcatttactagaagcactcaatttg
cccaaagacaccccaagaattgtctttcatgagattaccaaaagtgccattactaacgcc
attgttaagcctagaacggttgattatcagttggtagatgctcaacaagcgcgtcgcgtt
attgacagattagtaggttttgaaatatcgcctgttctatggcgcaagatttcaggcgcg
cgttccgctggcagggtgcaatccccggtgatgcgcctcgtggtcgaaagagagcgagaa
attagccaacatattaccaattctacttacaaagtcaaagcagagttagtgagtggaggc
ggcaaagtatttgaggttaaactgagcaaggagtttgaatctaaagagcaagcattggcc
tttgctaatgcacttttatcggctaatttaaccgttgcatcaactgataaaaagtcctct
aaacgctcatctaagcccccctttatcacctcaaccttgcaacaagaagcctctcaaaaa
ttaggcttttcagttaagcaaaccatgactttggcacaaaatttgtaccgtgaaggctct
attacttatatgcgaactgattcatttacgctgtcagaaacaacaattgaggcagccggt
caagtcattgcaaaaggatttggcagtgactatcaccacataagacgatataaaaccaaa
gatacgggcgcacaagaagcgcacgaggcaattcgcccaaccgatttaaccaagcccagt
atttttggtattgaagatcaagccgccaaattatatagcctgatttacaaacgcacattg
gcttgccaaatgagcgatgcccaactacaaaaaacccaaataaaaatcaatatttcagga
cttgatgaaaaattcatagccaatggcgaaatattgacatttccagggtttctaagagtt
tatgattatctgtcatcagagaataaattactacctgatttaaacaaaggtgatgcgctg
ggtttagctagttttaaagctagagagagtttttcaagagccaagcctcgctataccgaa
gcctcactggtgaaaaaaattgaagaaatgggcatcggtagaccttcaacattcgccact
atggtatcgacagtgcaagacagaaattacgttacaaaagagaccagagagggtgttgaa
cgtgcgtatcaattagttgaaatcaaagataatcaagtcattcaatcacaaccaaacgag
gtaacaggcgctgaaaaaaacaaactgttcccaaccaatgttgcctatttacttactgat
tttttagtcaaatattttgacaacattattgattataaattcactgctaaacttgaaagt
gattttgacaccattgccacacaaaatgttccatggcaaggcgtggttaaaaacttttac
accccttttcatcaaaaaatagaagatgctgctgacatttccagagaagaaacccatggc
atgcgcgaacttggcaccgatccaaaaagtggtaaacccgtcagtgtgcgctttggcaga
tacggtgctttcgcccaaatcggccataaagacgacgaagacaaaccagcctttgcctca
ctcaggggttcattagacattgagagcatcgctcttgatgaggctttagaattattcaat
atgccccgcaccgttggcgaaactgataattttggcaccatcaaagctaactatggtcgc
tttggtccctatatccaatatggcaagaaatacgcctcactcaaagaagataccccagaa
gaagtcagtctagaaaaagcactagaactcattaaagctaaagaaaaattcgacgccgaa
cgcatcatcaaaacctttgatgactccgacatccaagtcctcaacggtcgttttggcccc
tacatctggaacggcaagaaaaaaggaaaaggccaaaaaaatatcaccatcaaaaaagtc
ttcggcgataaagcccccgccgacctaactcttgaagaatgcaaaaaagcggttgctggt
aaaataaaagccaaagtcaagcccaaaaagaagatagttaagaaaaaagttactataaag
gtagatccagtgccaagtatttaa
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