Arcanobacterium phocisimile: JTE88_00025
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Entry
JTE88_00025 CDS
T07205
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
apho
Arcanobacterium phocisimile
Brite
KEGG Orthology (KO) [BR:
apho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apho03032
]
JTE88_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
apho03400
]
JTE88_00025 (gyrB)
Enzymes [BR:
apho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JTE88_00025 (gyrB)
DNA replication proteins [BR:
apho03032
]
Prokaryotic type
DNA Topoisomerases
JTE88_00025 (gyrB)
DNA repair and recombination proteins [BR:
apho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JTE88_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
PEPcase_2
Motif
Other DBs
NCBI-ProteinID:
QRV02967
LinkDB
All DBs
Position
5412..7445
Genome browser
AA seq
677 aa
AA seq
DB search
MTNDETTQRAGTVAKGTEYNASNITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNS
VDEALAGYASEITVTLLDNGGVKVEDDGRGIPVDIHPTEGVAAVQVVMTVLHAGGKFGNG
SYAVSGGLHGVGISVVNALSSRMDTEVRRDGYVWRISYENGVPVAPLEKGEVTDRTGTTQ
TFWPNADIFETVEFDFDTLRQRFHQMAFLNKSLKITLIDERETAVVEGDEVTGDENDVET
KHTQVTYRYDNGLHDYVTHLIKTKKAEPVHSEPIYFEAEDTERVISVEVAMQWTNGYSES
LHTFANTINTTEGGTHEEGFRTALTSIINKYARDKGLLKEKDANLTGDDIREGLTAVISV
KLGEPQFEGQTKTKLGNTEARTFVQQTTYAQLTDWLDMHPADGKEIIRKAMQAQTARLAA
RKAREATRRKSVLESAAMPGKLKDCTSNNPAECEIFIVEGDSAGGSAVNGRDPNHQAIMP
IRGKILNVEKARLDRALSSDSIQSLITAFGTGVGEEFDIEKLRYHKIVFMADADVDGQHI
ATLLLTMVYRYMRPLIERGYIYLAMPPLYRIKWTNADHEYVFSDKERDIKLEEGLAAGKR
LPKAEGQGIQRYKGLGEMNDSELWDTTMNPDTRTLKRVSIGEAAATDESFSILMGEDVAS
RRSFIQRNAHDVRFLDI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgatgagaccacacaacgtgccggaacagtagctaaaggtactgagtacaat
gcatcgaatattacggtcctagaaggtctcgaagctgttcgcaagcgtccaggtatgtac
attggttcaaccggagaacgaggacttcaccatcttgtctacgaagtcgtagacaactcc
gttgacgaagcacttgctggatatgcttccgaaattactgtcactcttctcgacaacggt
ggcgtcaaagttgaagacgacggccgtggaatcccagtcgatattcacccaaccgaaggc
gtcgcagcggtccaggttgttatgaccgttctgcatgctggtggtaaattcggcaacggc
tcctacgccgtttcaggtggtttgcatggagttggtatttccgtcgtgaacgcactatcg
tcacgcatggatactgaagttcgccgtgatggctatgtttggcgaatctcgtatgaaaac
ggcgtcccggtggccccgcttgaaaaaggcgaagtaaccgatcgcaccggcaccacccaa
actttctggccaaacgcagacatcttcgaaaccgttgaattcgatttcgatacgttacgt
cagcgattccatcagatggcattcctgaacaagagcctgaagatcacgttgattgacgaa
cgggaaaccgccgttgttgaaggcgatgaagttaccggcgatgagaacgacgtcgaaacc
aagcacactcaggtcacgtatcgatacgataacggcctacacgactacgttacccacctg
attaaaaccaagaaggcagaaccggttcattctgaaccaatctacttcgaagccgaagat
accgagcgggttatttctgttgaagtcgctatgcaatggaccaacggatactccgagtcg
cttcacaccttcgctaacacgattaacaccactgaaggtggaacccacgaagagggcttc
cgtaccgcgttgacgtcgatcatcaataagtacgcccgcgataaaggtctgctgaaagaa
aaagacgcaaacctcaccggtgacgatatccgtgaagggcttactgccgtcatctccgtc
aagctcggtgaaccacagttcgaaggccagacgaagacgaagctcggtaataccgaagca
cgtaccttcgttcagcaaactacctatgcgcaactcaccgactggctcgatatgcatcca
gccgacggtaaagaaattatccgcaaggcaatgcaagcacaaaccgctcgtcttgcggct
cgtaaagctcgtgaagccacccgtcgtaagtccgtcctcgaatcggctgcgatgcccgga
aaactcaaagactgcacttcgaataatccagccgaatgtgaaattttcatcgtcgagggt
gattccgcaggcggttctgccgttaacggccgcgacccaaaccaccaggcaatcatgccg
atccgtggaaagatcctcaacgtggaaaaggcacgtctcgatcgtgcactatcttccgat
tccatccaaagcctgattaccgcattcggtaccggtgttggagaagaattcgatatcgaa
aaattgcgttaccacaagatcgttttcatggccgatgctgacgtcgatggacagcacatc
gcaaccttgctactcaccatggtttaccgctacatgcggccactcatcgagcgcggatac
atttacttggcaatgccaccgctgtaccgtatcaagtggacgaacgcagaccacgaatac
gtcttctctgataaagaacgtgacatcaaactcgaagaaggcctcgcggccgggaagcga
ctaccgaaggctgaaggtcaaggtattcagcgatacaagggtcttggtgagatgaacgat
tcagaactgtgggacaccacaatgaatccagatacgcgcacactcaagcgcgtcagtatc
ggtgaagctgctgcaactgacgaatccttctccatccttatgggtgaagacgtcgcatcg
cgccgctccttcatccaacgcaacgcgcacgacgtccgattcctcgatatttaa
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