Arcanobacterium phocisimile: JTE88_03055
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Entry
JTE88_03055 CDS
T07205
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
apho
Arcanobacterium phocisimile
Pathway
apho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JTE88_03055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apho03019
]
JTE88_03055
03016 Transfer RNA biogenesis [BR:
apho03016
]
JTE88_03055
Enzymes [BR:
apho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JTE88_03055
Messenger RNA biogenesis [BR:
apho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JTE88_03055
Transfer RNA biogenesis [BR:
apho03016
]
Prokaryotic type
tRNA degradation factors
JTE88_03055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
PNPase
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
PCB_OB
DUF4618
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QRV02731
UniProt:
A0ABX7IIB5
LinkDB
All DBs
Position
690426..692789
Genome browser
AA seq
787 aa
AA seq
DB search
MEGPDVKFAEAVIDNGSFGTRTIRFETGLLARQAAGCAVAYLDDETTVLSATAVSSQPKE
HFDFFPLTVDVEERSYAAGRIPGSFFRREGRPTTDAILAARLIDRPLRPAFVKGLRNEVQ
VVATILTIHPDDAYDVVAINAASMSTQLSGLPFSGPIGGVRISLIDGQWVAFPRWSEMPR
ATFTMVVAGRIVGDDVAIMMVEAEGGENAIENIAKGGVKPTESVVAEGLDAAKTFIRVLC
EAQAELAAQAAKPTEEYPLFPSYEDAEYEAVAGKLGNRFEELWGIVDKHERDDALNELTA
KIVESLTEEFPEREQALSLAVNAHWKKAMRERVLTTGERMDGRTPVEIRTITAESGILPR
VHGSALFQRGETQIMGVTTLNMLKMEQQMDNLSPVTSKRYIHHYNFPPYSTGETGRVGTP
KRREIGHGMLAERALVPVLPSRDEFPYAIRQVSEALGSNGSTSMGSVCASTISLMNAGVP
LRAAVAGIAMGLVSGEIDGEQRYVALTDILGAEDALGDMDFKVAGTRDFVTALQLDTKLD
GIPAEVLGAALSQAHDARQAILDLIEEAVPEPEEMAQTAPRIISVKIPVDKIGEVIGPKG
KMINQIQEDTGADISIEEDGTVFIGATNGTSAEAARQTINQIANPTMPEVGERFVGTVVK
TTTFGAFISLAPGKDGLLHISQIRRLVGGKRVENVEDVLNVGDKVEVELAEIDQRGKLSL
HAVLTEEQLEAEKAAEEEFKAKRAERGENSDNGERRDRGERRERRPRRRTRKGEESGENN
ETAQSAE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggagggtccagacgtaaaatttgctgaagccgttattgataacggatcatttggcact
cgaaccattcgtttcgaaacaggcctattggcacgccaggctgcaggttgtgcagtcgca
tacttagatgatgaaaccaccgttctttcggcaaccgctgtttccagccagccaaaagaa
cacttcgatttcttcccacttaccgtggatgtcgaagagcgctcatacgctgccggtcgc
atcccaggatcgttcttccgccgcgaaggccgtccaaccaccgacgctatcttggctgct
cgcctgatcgaccgtccattacgcccagccttcgttaagggcctgcgtaacgaagtccag
gttgtggcaaccatcctcaccattcacccagatgatgcatacgacgtcgtagccatcaac
gctgcgtcgatgtccactcagctgtccggtttgccattctctggccccatcggtggcgtt
cgtatctcacttattgacggccaatgggtagcattcccacgctggtcagaaatgccacgc
gcaaccttcaccatggttgttgccggccgtatcgtaggcgacgacgtcgccatcatgatg
gttgaagcagaaggtggcgaaaacgccatcgagaacatcgctaagggtggcgtcaagcca
accgaaagcgttgttgctgaaggcctcgacgccgcaaagaccttcattcgcgtactgtgt
gaagcacaggcagagctcgccgcacaggcagcaaagccaaccgaagaatacccactcttc
ccatcctatgaagatgcagaatacgaagcagttgcaggcaagctcggcaaccgtttcgaa
gagctgtggggcattgttgataagcacgaacgcgatgacgctctcaatgagctcaccgcc
aaaatcgtcgaatccctcaccgaggaattcccagagcgtgaacaagctctgtcattggca
gtcaacgcacactggaagaaggcaatgcgtgaacgcgtattgaccaccggtgagcgcatg
gacggccgtaccccggttgaaatccgtaccatcaccgcagaatctggtattttgccacga
gttcacggttcggcactcttccagcgcggcgaaacccagatcatgggtgtcaccacgctg
aacatgctcaagatggaacagcaaatggataacctttccccggttacctccaagcgctat
atccatcactataacttcccaccatactcaaccggtgaaaccggccgcgtaggcacacca
aagcgccgcgaaatcggccacggtatgctcgcagagcgcgccctcgtgccagttttgcca
tcgcgtgatgaattcccatacgctatccgtcaagtctccgaagcactcggttcaaacggt
tcaacctcgatgggctcagtatgtgcatcaactatttcgttgatgaacgccggtgttcca
ctgcgcgcagcagttgccggtatcgctatgggtcttgtctcaggcgagatcgacggcgaa
cagcgttacgttgccttgacagacatcctcggtgccgaagatgctctgggcgatatggac
ttcaaggttgctggtactcgtgactttgtcaccgcgcttcagcttgataccaagctcgac
ggtatcccagcagaagtattgggggcggcattaagccaagcacacgatgctcgccaagca
atcctcgacctgatcgaagaagcagttccagaaccagaagaaatggctcaaactgctcca
cgcatcatttccgtgaagatcccagttgacaagatcggcgaagtcatcggacctaaaggc
aagatgatcaaccagatccaagaagatactggcgcagacatctcgatcgaagaagatgga
actgtcttcattggtgcaaccaatggaacatcggctgaggcagctcgccaaaccatcaac
cagatcgcaaacccaaccatgccagaagttggcgaacgcttcgttggaaccgtcgttaag
acaaccaccttcggtgcattcatctccttggcaccaggcaaggacggcctgcttcacatc
tcgcagatccgccgcctcgttggtggcaagcgcgttgagaacgtcgaagatgttctcaac
gtgggcgacaaggtcgaagtcgaactcgctgaaatcgatcagcgtggaaagctttccttg
cacgccgttctcaccgaagaacagctcgaagctgagaaggccgccgaagaagagttcaag
gcaaagcgtgcagagcgcggcgagaactccgacaacggcgaacgccgtgaccgtggcgaa
cgccgcgagcgccgtccacgtcgtcgcacccgcaagggtgaagagtctggcgagaacaac
gaaaccgctcaatcagctgagtga
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integrated database retrieval system
