Arcanobacterium phocisimile: JTE88_03820
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Entry
JTE88_03820 CDS
T07205
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apho
Arcanobacterium phocisimile
Pathway
apho03030
DNA replication
apho03430
Mismatch repair
apho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JTE88_03820
03430 Mismatch repair
JTE88_03820
03440 Homologous recombination
JTE88_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apho03032
]
JTE88_03820
03400 DNA repair and recombination proteins [BR:
apho03400
]
JTE88_03820
Enzymes [BR:
apho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JTE88_03820
DNA replication proteins [BR:
apho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JTE88_03820
DNA repair and recombination proteins [BR:
apho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JTE88_03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Fe_hyd_lg_C
Motif
Other DBs
NCBI-ProteinID:
QRV02860
UniProt:
A0ABX7IJ29
LinkDB
All DBs
Position
complement(857429..859240)
Genome browser
AA seq
603 aa
AA seq
DB search
MKNIRSVPPGRRLDTEVVPIHRRGQSPIEPQQLAFDDLGLSLEQATFLVVDVETTGEKPG
LHSLTEIGAVKVRGGEVIGEFGTLVNPGIPIPAFISRLTGISTAMVTTAPSLAEVMLAFI
EFIGHDSELIYVAHNARFDIGQLTGAAQAVGLEFPQRRTVDTVKLSRRVFTRDEVPNYKL
SSLARLVGATTTPTHRALDDARATVDVLHAVLSRLGPLGVTHVDDLMTAHSGVPSKRRKK
ISLADGLPRGSGVYQFVGPNDEILYIGVSGNVYKRVRSYFTAAEKRRRIGEMVDLAERVE
AIETATLIEAEILEIRLIREIRPRYNKRSKPRSRYWLRLTQEPHPRLTITKVVLREHVDH
VLGPFTRFAHAKQAKELIESVSGLRTCSQTLPAVADGRLPCHMAELNLCDAPCVTGIEQR
QACRAAAHAISGNLDVIYSATQERMAKLSQLERFEAALAERERLYALVNGAVAGAICLPL
VHAGRIIAAAPSDEKSASWEVIVIDHGRFVQSMVVAADIQVHRFAEEFMATHPLSVLPER
PFESVSTDELRCLSRWLWRDGVRIVVASKPDALSTPLDHAQKIKLPTIPGFDEGIMGSLE
HLD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatccgttcagttcccccagggcgacggttagataccgaagttgtcccgatt
catcgccgtggccagtcacctattgagccacagcagttggcgtttgacgatttagggctg
tccttagaacaggcgacgttcctcgtcgtcgatgttgaaactactggagaaaagcctggg
ttacactccttgaccgaaatcggtgcggttaaggtgcgtggcggtgaagtgatcggcgaa
tttggcacactagttaatcctgggatacctattccagcttttatttctcggttgactgga
atatcaactgccatggtcacaactgccccatcgttggctgaagttatgctggcgtttatc
gagtttatcggtcatgattcggagcttatctacgttgctcataacgcacgctttgatatc
gggcagctcaccggtgccgcacaagctgtagggctggagttcccgcaacgacgaacagtt
gatactgttaagctttctcgtcgtgtatttactcgcgatgaagtacctaactacaagctt
tcctcgctcgcacggttggtaggggcaacaactacaccgacccaccgcgcattggacgat
gcacgtgccaccgtcgatgtccttcatgctgtcttatctcggctcggtccattgggtgta
actcatgtcgatgatttgatgactgctcactcgggggttcccagcaaacgtaggaaaaaa
atctcattggctgatggtctacctcgaggtagcggcgtctatcagttcgtcggccccaat
gatgaaattctctatatcggagtttcagggaacgtttataaacgagttcgcagttatttc
acagctgctgagaaaagacgacgcataggtgagatggtcgatctagctgagcgggtagaa
gcaattgaaacagctaccttgattgaagctgagattcttgaaattcgattgattcgtgag
atccggccacgttacaacaagcgatcaaaaccgcgatcgagatattggcttcggctcaca
caagaaccccatccgcggttaaccatcacaaaggtagtattgcgtgaacacgtagatcac
gtgcttggccccttcactcgcttcgcacatgctaagcaagcgaaagaactcatcgaaagc
gtgtccgggttacgcacgtgcagtcaaacgttgccagctgtcgctgacgggcgtctaccc
tgtcatatggcagagttgaatctttgtgatgcgccttgtgttaccggaattgaacagagg
caagcttgtcgagcagccgcccacgccatttcaggcaatctagatgttatctattcagcc
acgcaagaaagaatggctaaactgtcccagctcgaacggttcgaagccgccctagccgag
cgtgaacggttgtatgccctggtcaatggcgcagtagcaggagcaatctgtcttccgctc
gtacatgctggcaggatcatagcggcagctccaagcgacgaaaaaagcgctagttgggaa
gtaatagtgatcgatcatggccggttcgtgcagtcaatggttgtcgcagctgatattcag
gtacaccgatttgccgaagagttcatggctactcacccgttaagcgtgcttccggaacgt
ccatttgaatcagtatctaccgatgaactgcgctgtctttctcgatggctttggcgcgac
ggcgtccgaatcgtcgtcgccagtaaaccagatgcattatcaactccgcttgaccacgcg
caaaaaatcaaacttcccacaattcctggtttcgacgaaggaattatgggaagcctagaa
catcttgattga
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