Arcanobacterium phocisimile: JTE88_04025
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Entry
JTE88_04025 CDS
T07205
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
apho
Arcanobacterium phocisimile
Brite
KEGG Orthology (KO) [BR:
apho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apho03016
]
JTE88_04025
Enzymes [BR:
apho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JTE88_04025
Transfer RNA biogenesis [BR:
apho03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JTE88_04025
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QRV02897
LinkDB
All DBs
Position
complement(906796..908001)
Genome browser
AA seq
401 aa
AA seq
DB search
MTSENPDLHFLAQPRDGLPDITHENIAEAIDALRHGTGPFAVDTERAMGIRYSNRAYLVQ
VKRAGAGIFLIDPVGIEDQLSDLASVMDDEWILHAADQDLPSLRELGLEPERVFDTELAG
LILGFDRVSLQAMIADELGFGLAKEHSDADWSQRPLGPELRAYAALDVDLLLELRQSLIE
KLHEAHRWEWFVQECNEVQYRLPNPPHPQPWRKAVKYAKLPDQRALGMLRELWITRDELA
KHRDLAPGKVLPNKLLANLAARKPRSLADVKNSSLFRSRSRRRDVEIWWDAINRAWSLPQ
AQLPERRFQYARDPFPPVQRWEKLDPQAAQRWSKLRQAVLDHAEMLGIRQEVVLKPRIQK
QLAWEGWNSADQLRERLTQFGARPWQIEQVSLALSSKRATR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgagaatcccgatcttcattttttagctcaaccgcgcgatggacttcccgat
atcactcacgaaaatattgccgaggctattgatgcgttacgtcacgggactggaccattc
gcagtcgatactgaacgcgcgatggggatcagatattcgaatcgtgcttatctcgtgcag
gttaaacgcgccggtgccggaattttcttaattgatccagtcggtatcgaagatcagctc
agtgatctggcatcggtcatggatgatgaatggattttacatgccgctgaccaagatttg
ccgagcttacgagaattaggtttagaaccggagcgcgtttttgataccgaactggctggg
cttatcctcggctttgaccgtgtttcgttacaagctatgatcgcagatgaactcggtttc
ggactggctaaagagcactctgatgctgactggtcgcagcgtcccctcggtccggaattg
cgggcctatgcggcacttgacgtcgatcttcttctcgagctgcgccagtcactgatcgaa
aagctgcacgaagcacaccggtgggaatggtttgtgcaagagtgcaatgaggtccaatat
cggctgcccaatccgccgcatccgcaaccgtggcggaaggcagtgaagtatgcaaaactt
ccagaccagcgggcacttggtatgctacgtgaactgtggataacacgagatgaactcgcc
aaacaccgggatctggcccctggcaaggttctaccgaataagttgctggctaatctcgcc
gcacgcaaaccacgttcattagcggacgtaaagaattcctcacttttccgttcccgttcc
cgtagacgtgatgttgagatctggtgggatgccattaatcgggcatggtctctaccccaa
gcgcaactgcctgaacggcgttttcagtatgcacgagacccgttcccgccggtacaacgt
tgggaaaagcttgatccgcaggcagctcaacgatggtctaagctccgccaagcagtactt
gatcatgctgaaatgttgggtattcggcaagaagttgttctcaagccgcggattcaaaag
caacttgcatgggaagggtggaatagcgccgaccagctgcgagagcgtctcactcagttc
ggtgctcgcccgtggcaaattgaacaggtttcgctagctctcagttcgaaacgggcaact
cgctaa
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