Arcanobacterium phocisimile: JTE88_06215
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Entry
JTE88_06215 CDS
T07205
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apho
Arcanobacterium phocisimile
Pathway
apho03420
Nucleotide excision repair
apho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JTE88_06215
03430 Mismatch repair
JTE88_06215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apho03400
]
JTE88_06215
Enzymes [BR:
apho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JTE88_06215
DNA repair and recombination proteins [BR:
apho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JTE88_06215
MMR (mismatch excision repair)
Other MMR factors
JTE88_06215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QRV01689
LinkDB
All DBs
Position
complement(1375095..1378652)
Genome browser
AA seq
1185 aa
AA seq
DB search
MITYEEFVAAEKFPPTAEQRAVITSEHRATLVIAGAGSGKTATMANRIAWMLASKVAQPQ
EILGLTFTRKAAGELAERVTKKIREVSKRGLISFDGDVVSDDEWERIPENQTASMVQAKL
HRPTITTYNSFASQIATSYAMLIGENPDSRLMNEAERYQLMYEIVENSQLREALVDTSLD
TITRNALSLAAGIIDNDVSIEYIRKFLMEEVDAVNSILQPRMTAKTTPDKGSVERALYDR
AVKSFQRKKVGENLHGRLALVEYVEQYFVAKKERSLIEFADQVSWATRILETVPEVRTSV
QEAFPVVLLDEFQDTSVNQARFLKVAFSDARSVTAVGDPNQAIYGWRGASANAFADFIDD
YQVTAQARLSLSQAFRNATSILDAANQLTNGKLSYGELQIKKLRPAPAAPAGEVIRIHRH
YAQDTYHALAMRLADELRNSHEQKVPSIAVLVRNHSFEKSVIKALDDVGVPYEVIGGQSL
IIRPEIRAVRALLAIADNPQRNDQLLYLLNFFGLGLNDLRHFSAVAEDVARAEQSRLWRE
LRQSAEEEKVEELKQASKRPAVSIVQALLSHDDFSKLSLSGQERIQYIARLVHQVQEQRH
KPLSVVVSTAIDALDLYVYATTRSKGGAALKAALTGFIKLAGTYHGQEPSARLSSFLSWI
DAMEVHEHAGEITPASDLSLSEEVTPQSGIVQVLTVNAAKGLEWDIVAVPELVEKRFDYI
KRRYPLWHKNNDVFPTSLRADAHHVPIFSAQDYLDGEDLQFRKCEALIEYAKYEKAVKAQ
SGDEERRLAYVALTRPRRLLLLLTYDFLDEEAAGKEYRSALASQEGEGEEDSGTSKCNEQ
THTLLDNGRRQSDADTDAVPAPLYFSNVFIEDLEGKLTPDRGYEEPFTDQASVIAWGEKH
NLPAEEPKIGDSVVSSSGISWPTSVDREVEPYSGGTPIGTVDIAKIKAVWQETYNRLVEE
NSRQNDQQQGVQREYLTASDIVSLMSDAQEFYRDQRRPIPRRVSQASRIGTSVHQAIAEH
FDSVLTLDIDSVLSPEEMPIDQDVFKDDETVRQYLHRFETSRFANVPHIAIEQALEIQLA
GYPVRCVIDAVLDTSNIPGAKPVTIVDWKTGKQPSQEQLHARELQLGLYRLAWSQAHNIE
LADIDACFYYLGEADPARREVHAGQLSEEQITQAIKQSLESVQTN
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgataacctatgaagaatttgttgctgcagaaaaattcccacccactgcggaacaacgt
gcagttattacctccgagcatcgagcaacgcttgttattgctggtgctggatcaggaaaa
acagcgacgatggcgaaccgaattgcgtggatgctggcctcgaaagtggcccagccacag
gaaattctggggctaacgtttactcggaaagccgcaggtgaattagctgaacgggtgacg
aagaagatccgtgaggtctccaagcgtgggctgatctccttcgatggtgatgtagtttcc
gatgatgaatgggaaaggattcctgaaaaccagacggcttcgatggtacaagcaaaactc
caccggcctacgattacaacatataattccttcgcctcgcagatcgccacatcatacgcc
atgctcattggggaaaatcctgactctcggttgatgaatgaagccgaacgttatcagctg
atgtacgaaatcgtcgaaaatagtcagttgcgcgaggctttggtagatacatcactagat
accattactcgcaatgcgttgagtctagctgctgggataatcgataacgacgtgagcatt
gaatacattcgcaagttcttgatggaagaagtagacgcagttaattcgatcctgcagccg
cggatgactgcgaagacaacaccagacaaaggatctgtcgaacgtgcgctctacgatcgc
gctgtgaagagtttccagcgcaaaaaagtcggagaaaatctccatggtcggcttgccctt
gtggaatatgttgagcagtatttcgtggctaagaaagaacggtccttgattgaattcgcc
gatcaggtttcgtgggcaacgcgcattcttgaaacagttccagaggtgcgcacatcagtg
caggaagccttcccagttgtcctacttgatgagttccaagatacttcagtcaaccaggcg
cggtttttgaaagtagcgtttagtgatgcgcgatcagtgacggctgtgggagacccgaac
caggcaatttacggttggcgcggcgcctcagccaatgccttcgctgatttcattgatgac
taccaggtcactgcccaagcccggctgtcgctttcacaagcatttcgtaacgcgacgtcg
attcttgatgcagccaaccaactcaccaacgggaaactctcctatggggaacttcaaatc
aaaaagctacgtccggcacctgcagcacccgccggtgaagtaattcgcatccatcgccat
tacgcacaggacacatatcatgctttggctatgcgattagctgacgaactccgcaactcg
cacgagcagaaagttcctagtattgctgtattggtgcgcaaccacagttttgaaaaatca
gtaatcaaagcacttgatgatgttggtgtgccctacgaggtcattggtggccaatcgctg
attatccgcccagaaattcgcgcagttcgagctttgcttgcgattgctgacaatccacag
cgcaacgatcagcttctgtatttattgaacttctttggcctgggattgaatgacctgcgg
cacttttcggcagttgccgaagatgtcgcgcgtgcagaacaatctcgcttgtggcgcgag
ctgaggcagagcgcggaagaagaaaaagtagaagaactcaaacaagcctcgaaacgtcca
gctgtgagcatagtgcaggcattgctcagccatgacgatttcagtaagctcagcctgagc
gggcaagaacggatacagtacattgcccggctggtacatcaagtccaagaacagcgccac
aagccactgagcgtcgtggtctcgactgcgatcgatgctctagacctctatgtatacgcc
accacccggtctaagggcggcgccgcattgaaggctgcgttgactggtttcatcaagcta
gctggaacctatcacggccaagaaccttcggcacgactgtctagtttcttgagctggatc
gatgcgatggaagtccacgaacatgcaggtgaaattaccccggcatccgatctttcattg
agcgaagaagtaacaccgcagtccggtatcgtgcaagtccttacagtcaacgctgctaaa
ggactggagtgggatatcgtggcggttcctgaactcgtagaaaagcgtttcgattacatc
aaacggcgctatccgctttggcataaaaacaacgatgtctttccaacgtcgttgcgtgcc
gacgcacaccatgtgcctattttctcggcacaagactacctcgacggtgaagacttacag
ttccgtaaatgtgaagcgttaattgaatacgcaaaatacgaaaaagcagtaaaagcgcag
tcgggtgacgaagaacgccgtctggcctatgttgctctgacccgtccgcgtcgtctgttg
ctcttgcttacctatgatttccttgacgaagaagcagctggaaaggaataccgtagtgcg
ttggcaagccaagagggcgaaggtgaagaagattctggcaccagcaaatgcaatgaacaa
acccacacgttactagataatggcaggcgtcaatcggacgcagacacagatgcggtaccg
gcaccattgtacttctcgaacgttttcatcgaagatcttgaaggaaagctaacaccggac
cgcggatatgaagaaccatttacagaccaagcttcagttatcgcttggggagaaaagcac
aacctcccagctgaagaaccaaaaatcggtgattcagtggttagctcgtccggtatttcc
tggcccacaagcgttgaccgggaagtcgaaccatactcgggcggtactccgataggcaca
gtcgacatagcgaaaattaaagcagtatggcaagagacatacaaccggttagtagaagaa
aattcgcgccagaacgatcaacaacaaggtgtccagcgtgaatatctcaccgcctcggac
atcgtttcattgatgagtgatgcgcaagagttctatcgggatcagcgtcgcccaattcca
cgacgggtctcccaagcgtctcggatcggaaccagcgtacaccaagcaatcgcagagcat
ttcgattccgtcctaacgctcgatattgattcagtcctcagcccggaggaaatgccaata
gaccaagatgtatttaaggacgacgaaactgtgcggcaatatcttcaccggtttgaaact
tcacggtttgcaaacgttccgcatattgctatcgagcaagctttggaaattcagttagct
ggctatccggtgcgttgcgtgattgacgcagtgctcgacacgtcgaatattccaggagca
aaaccagtaacgattgtggattggaaaaccggaaaacaaccttcgcaagaacaactccac
gcccgtgaacttcagcttgggctttaccgcctggcatggtcacaagctcacaacatcgaa
ctagccgatatcgatgcgtgcttttactatctaggtgaagcagatcctgctcgccgcgaa
gtccatgccggtcagctcagtgaagaacagataacgcaagcgattaaacaatcgttggaa
tctgtgcaaacaaactga
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integrated database retrieval system
