Arcanobacterium phocisimile: JTE88_08395
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Entry
JTE88_08395 CDS
T07205
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
apho
Arcanobacterium phocisimile
Brite
KEGG Orthology (KO) [BR:
apho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apho03032
]
JTE88_08395 (topA)
03400 DNA repair and recombination proteins [BR:
apho03400
]
JTE88_08395 (topA)
Enzymes [BR:
apho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JTE88_08395 (topA)
DNA replication proteins [BR:
apho03032
]
Prokaryotic type
DNA Topoisomerases
JTE88_08395 (topA)
DNA repair and recombination proteins [BR:
apho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JTE88_08395 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QRV02078
LinkDB
All DBs
Position
complement(1843511..1846270)
Genome browser
AA seq
919 aa
AA seq
DB search
MTKLVIVESPAKARTVANFLGDEYEVTASVGHIRDLPKPSDLPADMKKGSFGKFAVDVEH
NFEPYYVVNTDKKKKVTELKAALKKADELWLATDEDREGEAIAWHLLEVLKPKIPVKRMV
FHEITKEAIQRALEATRDLDTKLVDAQETRRILDRLVGYEVSPLLWRKVAPSLSAGRVQS
VTTRLVVERERERMAFVPAGYWDVAVEMAKDSESFTAKLLDVDGARVAVGKDFDDDGQLK
PKSAKEGVRVLTEDDAQAISALLSSGNSTVVSVETKPYRRRPAAPFTTSTLQQEASRKLS
MNSRDTMRVAQSLYENGFITYMRTDSVNLSSQAIAAARSQIKDMYGAHSLPDKPRIYSTK
SKGAQEAHEAIRPAGDSFRTPAQVASELRGREFALYELIWKRTVASQMADATGSTASIRL
TASLDNVVGSEARLGVSGTIITFPGFMAAYEEGKDKKRYEEQAESQLPELAEGETVTNVE
AQAGGHETAPPPRYTEASLVKTMEEKGIGRPSTYATTISTITDRGYVDRKGQALVPTWLA
FAVIRLLEENLPDLVDYDFTADMEEDLDKIAAGEEDPVEYLGGFYRGADEKKGLRDQVDG
LGDIDARAVNTIDIGDNIAVRVGRYGPYLEETKSDGTAGKRASVPPEVAPDELTVAKAHE
LLDAAMQEDRVLGQNEKGWDVVVKDGRFGPYVSEVVPDDAVQLTPTGKVSKVKPKPATAS
LFKSMNPDTVTIEQALQLLSLPRELGEIDEELVTVHNGRFGPYMRKGSDSRSLESEEQIF
TITLDEAKDIFAQPKQRGKRQAQPPLAELGKDPVSGGTILLKDGRFGLYVTDGETNASLP
RSEDPNQITAERAQDLLVQRRLKIAEQGGPKKRNATKRTVTGAGKKKTAAKKSTTKKTTG
KKPAAKKASAPEADAAKKA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaagcttgtgattgtagagtctcctgccaaggcgcgtactgtcgccaactttctc
ggtgatgagtatgaagtaacagccagtgttggtcatattcgtgacctgcccaagccctct
gatctgccagcagatatgaagaagggttcgttcggcaagttcgctgtggatgtggagcac
aatttcgagccttactatgtggtcaatacagataagaagaaaaaggttaccgagctcaag
gctgccttgaagaaagcagacgaactgtggctcgcaactgatgaggatcgcgagggagag
gccatcgcttggcatctgctcgaagttcttaagccaaagattccagtcaagcgtatggtg
tttcatgaaatcaccaaggaagcaatccagcgtgcattggaagctacccgcgatctcgat
acgaaactagttgacgcccaggaaacccgccgtattcttgaccgtctcgtcggttacgaa
gtttctccattgctttggcgcaaggttgctccgagtttgtctgctggccgcgtacagtcc
gtcaccacccgcctcgttgttgaacgcgaacgtgaacgtatggcttttgtacctgccggt
tattgggatgtcgccgtcgagatggcaaaagattccgagtcgtttaccgccaaactactt
gatgttgatggtgctcgcgttgccgtcggtaaagatttcgacgatgacggtcagctcaag
ccgaaatcagccaaagaaggcgttcgggtactaaccgaagatgatgcgcaggccatctcc
gccttgctcagttccgggaactccacggttgtgagcgtggagacgaaaccgtaccgccgt
cgtccagctgcgccgtttacgacgtcgaccttgcaacaggaagcatcgcgtaaactttcc
atgaattcgcgagataccatgcgagtggcacagtcactgtacgaaaacggtttcattacc
tatatgcgtaccgattcggtgaatctgtccagccaagctattgccgctgcgcgctcgcag
atcaaggacatgtacggcgcgcattccctgccggataagccgcgcatttactcgactaaa
tctaaaggtgcacaagaggctcacgaagctattcgcccagccggtgattcattccgtact
cccgcgcaggtggcaagtgagctccgcgggcgcgaatttgcgctgtatgaattgatttgg
aagcgtacggttgcctcgcagatggcggatgcaaccggatcgaccgcctccatccggttg
actgcatcgttggataacgtcgtcggaagtgaagcgcgtttgggtgtttccggaaccatc
atcaccttccctggcttcatggccgcatacgaagaaggtaaagataagaagcggtacgaa
gaacaagccgagtcccagttgccagaactagccgaaggcgagacggttactaacgttgaa
gctcaagcaggtggccacgaaactgcgccgccgccacgctacaccgaagcgtcgctggtt
aaaacgatggaagaaaaaggcatcggtcgtccttccacctatgctacaacgatttctacg
attaccgatcgcggatatgtcgaccgcaaaggccaggcgcttgttcctacttggctggcg
ttcgctgtcattcgtttacttgaagagaacctgcccgatctggttgattacgacttcaca
gcagacatggaagaagacctcgataagatcgctgccggtgaagaagacccggtggaatac
ttgggcggtttctaccgcggtgctgacgagaaaaagggactgcgtgaccaagtcgatggc
ctcggcgatattgatgcgcgcgcggtgaacactattgatattggtgacaatatcgcggtt
cgtgttggtcgatacgggccatacctcgaagagaccaagtctgatggtacggctggcaag
cgtgcttcggtaccgccagaggttgcgccagatgaactgacagttgccaaagctcacgag
ctccttgatgctgccatgcaagaagatcgagttttaggtcaaaacgaaaagggctgggat
gtcgttgtcaaagatggccgattcgggccatacgtttccgaagtcgtgcctgacgatgcg
gtacagctgactccgactggcaaggtttccaaggtcaagccgaagccggcaacggcttca
ctcttcaagtcaatgaatccggatacggttacgattgagcaggcattacagttgttgtcg
ttgccgcgcgaactcggtgaaattgacgaggagttggtgacggtacacaacggacgtttc
ggtccgtacatgcgcaagggctccgattcgagatcgcttgaatctgaagaacaaatcttc
acgattacgctcgacgaagcaaaagatatttttgcccagcccaagcagcgcggcaagcgt
caagcacaaccaccgctggctgaactcggcaaagatccagtttctggcggcacgatttta
ctcaaagacggtcgatttggattgtacgtgaccgacggcgaaaccaatgcttccctgcca
cggtcagaagatcctaaccagatcactgccgagcgtgcccaagatctgttggttcagcgt
cggttgaagattgctgagcaaggcggaccgaagaagcgcaatgcaaccaagcgaaccgtg
acgggtgctggtaagaagaagacagctgccaagaagtcgacgacgaagaaaaccaccggg
aagaagccggctgcgaagaaggcttctgctccggaggcagacgctgcgaagaaggcataa
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