Acyrthosiphon pisum (pea aphid): 100159060
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Entry
100159060 CDS
T01076
Name
(RefSeq) U6 snRNA-associated Sm-like protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03018
RNA degradation
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100159060
09123 Folding, sorting and degradation
03018 RNA degradation
100159060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100159060
03041 Spliceosome [BR:
api03041
]
100159060
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100159060
mRNA degradation factors
5'-3' decay
Lsm complex
100159060
Spliceosome [BR:
api03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100159060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
100159060
NCBI-ProteinID:
NP_001156694
APHIDBASE:
ACYPI000470
UniProt:
C4WWA8
LinkDB
All DBs
Position
A3:8099972..8102932
Genome browser
AA seq
134 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVTCDSWMNINLREVICTSKDGDRFWRLPECY
IRGSMIKYLRIPDEIFDMVKEDIVVNKARGRTDNQKNRAPRGARQGFSGRGGGSNNRGTG
PQQQRGGPNKFRGK
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgttacctctttcattactaaaaactgctcagaatcacccaatgctggtggaattaaaa
aatggtgaaacatacaacggacatttagtgacatgtgatagttggatgaatatcaattta
cgagaagtgatctgcacatctaaagatggagatagattttggagacttccggaatgttat
attagaggtagtatgattaaatacctgagaatacctgatgaaatatttgatatggtaaaa
gaagatatagttgtaaacaaagctcgtggtcgaacagataaccagaaaaatcgtgctcct
agaggagctaggcaagggttcagtggaagaggaggtggtagtaacaaccgaggtactgga
ccacaacaacagagaggtggtccaaataagtttagaggaaaataa
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