Acyrthosiphon pisum (pea aphid): 100159507
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Entry
100159507 CDS
T01076
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
api03041
]
100159507
03016 Transfer RNA biogenesis [BR:
api03016
]
100159507
Enzymes [BR:
api01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100159507
Spliceosome [BR:
api03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100159507
Transfer RNA biogenesis [BR:
api03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100159507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
SRP1_TIP1
CMS1
Motif
Other DBs
NCBI-GeneID:
100159507
NCBI-ProteinID:
XP_001944084
APHIDBASE:
ACYPI000870
UniProt:
A0A8R2A080
LinkDB
All DBs
Position
A2:complement(76130012..76132656)
Genome browser
AA seq
725 aa
AA seq
DB search
MAAAFEEMGVLPEIGKAIEEMDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP
VIQIVWETLKQSGKHRDSLPGKMSGVTDPWAMSVWDRSSAVAVTPDGNKCQSREQKDWHG
CRATKGVKNSGKYYFETTVTDEGLCRVGWSTPGAVLDLGTDKFGFGYGGTGKKSNNKQFD
SYGQSFGLHDTIGCWLDLDNWTIGFSKNGTYLGDAFKIPANLKTSAFYPAVVLKNAEIAF
NFGESSLKYDIPKDFSAVSKAPSNCIELSQCNAPKIDSNTKKPSNAPYAIIIEPSRELAE
QTYNQIKKFKKYLEEPQVKDLLVVGGFSIKDQIAALSSGVDIIVATPGRLEDLISGGHLS
LSQCRFYILDEADGLLKQRYTKLIDNLHEKMPKVSNDGKRLQMIVCSATLHDFEVKKLVS
RLMHFPTWVDLKGEDAVPETVHHVVVNVDSQKDSSWTSLKNHIPTDGVHDRDNVRALNTS
EALSHGVKLLKGEYCVKAINKHKMDKALIFCRTKLDCDNLEKYFKQLGSFYTCCTLHGSR
NVNDRRMNLEKFKNGEIKFLICTDVAARGIDVNGLPFMINMTLPDDKTNYVHRIGRVGRA
ERMGLAISFVATIPEKVWYHGEWCPSRGQRCSNTNLTTSKGCCIWYNEPQYLAEIEDHLN
ITIPQVDSKLDIPMNEFDGKVMYGQKKTNKGPTYKNHYDQLLSTINELTQLETKAQYLYL
HMLNN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcgtttgaagagatgggcgttttgcccgaaataggtaaagccatcgaggaa
atggactggctgttgcctacggatgtccaagctgaagcgatacctctaatacttggcggt
ggtgatgtgttaatggccgcggagactggtagcggtaaaacgggagcgttttgtttgccg
gttattcaaatagtgtgggaaacactcaaacaatctggtaaacaccgggatagtttaccg
gggaagatgtctggtgtcacagatccctgggccatgagtgtgtgggatcgttcgtctgcg
gtggccgtgacgccagacggtaacaaatgtcaatcaagagagcaaaaggattggcacggt
tgtagagctaccaaaggcgttaaaaattcgggaaaatattatttcgaaacaactgtcact
gatgaaggtctgtgtcgagtcggctggtctacaccgggagccgttttagatttgggtaca
gataaatttggttttggctatggtggaactggcaaaaagtcaaataacaaacagtttgat
tcttacggacagagttttggtttacatgatacgattggctgttggttggatctagacaat
tggactattggattcagtaaaaacggtacatatcttggcgatgcgtttaaaatacctgca
aatttaaaaacatctgcattttatccagctgttgtattaaaaaacgctgaaatagcattt
aattttggtgaatcatcattgaaatatgatattcccaaagacttctctgctgtaagtaaa
gcacctagcaattgcattgaattatctcagtgtaatgctccaaaaatagattcaaatact
aaaaaaccaagtaacgcaccatatgcaataattattgaaccttctagagaattggctgaa
caaacttataatcaaataaaaaagtttaaaaaataccttgaagaaccacaagttaaagat
cttctagtagttggtggttttagtattaaagaccaaattgcagccttatcatcaggtgtt
gatattattgttgctacacccggccgcctggaagatcttatatccggtggccatttatct
ttatctcagtgtagattttatatactggacgaagccgatggattattaaaacaacgttat
acaaagcttatagacaatcttcacgagaagatgccaaaagtttcaaatgatggtaagaga
cttcaaatgattgtttgctcagctacacttcacgattttgaagtaaaaaaattggtgtca
cgtctcatgcactttccgacttgggttgatcttaaaggtgaagacgctgttcccgagact
gtacaccatgtcgtggttaatgttgactcccaaaaggattcatcatggacttcattgaaa
aatcatattccaactgatggtgtacatgatagagataatgtaagagcactaaatacatct
gaagctttatctcatggagtgaagcttttaaagggtgaatactgtgtcaaagctataaac
aaacacaaaatggacaaagctctcatattttgccgcactaaacttgactgtgataattta
gaaaaatacttcaaacaacttggttctttttatacttgttgtactcttcatggatcacgt
aatgttaatgatcgtagaatgaatttagaaaagtttaaaaatggcgaaattaagttctta
atttgtactgatgtagcagctcgcggaattgatgttaatgggttacctttcatgattaat
atgactttaccagatgataagactaattatgtacacagaattggccgtgtgggtagagca
gaacgtatggggttggccatttcatttgtggcaactatcccagaaaaagtgtggtatcac
ggtgaatggtgtccatccagaggacagagatgttcaaatactaatttaactaccagcaaa
ggctgttgcatatggtacaatgaaccccaatatttggctgaaattgaagatcatttgaac
atcactataccgcaggttgattcgaaactggatattcctatgaatgaatttgatggaaaa
gtcatgtacggccaaaaaaaaacaaataaaggacccacgtataaaaatcattacgaccaa
ctattgtctactatcaatgaactaacacaattagaaactaaggctcaatatttgtatttg
cacatgcttaataattaa
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