Acyrthosiphon pisum (pea aphid): 100159978
Help
Entry
100159978 CDS
T01076
Name
(RefSeq) cleavage stimulation factor subunit 1-like
KO
K14406
cleavage stimulation factor subunit 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100159978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100159978
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100159978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
CSTF1_dimer
WDR55
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_VPS8
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_WDR11_1st
Cytochrom_D1
Mcl1_mid
VPS8_N
DUF5899
Motif
Other DBs
NCBI-GeneID:
100159978
NCBI-ProteinID:
XP_001944413
APHIDBASE:
ACYPI001313
UniProt:
A0A8R2A7F9
LinkDB
All DBs
Position
X:complement(114524633..114526884)
Genome browser
AA seq
438 aa
AA seq
DB search
MSSNINNSNPSMCIKNRDNLYRLIISQLFYDGHSAIALSLATQVNANPPCSPSDRLMSVV
TRGLQHETDRQKESEQTLNLNPIQQMLIGPGIDIEFETNVICTAPEPSLYETIYVTSHKG
PCRAGAFSPDGQLIATGSSDASIKILDVERMLAKTHDIGRNDNHEGQGHPVIRTLYDHLE
EVTCLEFHPNKPILASGSRDCHVKLFDYSKTSMKKAFKTLNDAEPITCISFHPGGDYMVM
GTNSPIIRFYDVNTVQCYVCSVPSHQHTGPVTSIKYEPGAKYFVSSSRDGSIKLWDGISN
KCVNTFEKAHNGSQVCSVTFTRNGKYILSSGKDSLVKLWELSTSRCLIEYTGAGTTGKQV
HRTQAFFNHTEEYVMFPDEVTTSLCAWNARNACRQQLLSLGHNGSIRSIVHSPNSAAFLT
CSDDFRARFWYKKHLIGT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatataaataattccaatccttcaatgtgtattaagaatagagataattta
tacagactcataataagtcaactcttttatgatggtcattccgcaattgctttaagctta
gctactcaagtaaacgctaatccaccttgttctccatcggatcgactcatgagtgtagtg
acaagaggtttacaacatgaaaccgatagacaaaaagaatctgaacaaacattaaactta
aatccaattcaacaaatgttaattggaccaggcattgacatagaatttgaaactaatgtt
atttgtactgctcctgaaccgtcgctgtatgaaactatatatgtaacatctcacaaagga
ccctgtagggctggtgcatttagtcctgatggtcaattaattgcaacaggaagcagtgat
gcatcaatcaaaattttggatgttgaaagaatgctggctaaaacacatgatattggcaga
aatgataatcatgaaggacagggtcatccagtaattcggactttgtatgatcatttggaa
gaagtgacatgcttagagttccaccctaacaagccaattttagcttcgggctctcgagat
tgtcatgttaaactttttgattattcaaaaacatctatgaagaaagccttcaagacactt
aacgatgccgaacctataacatgtataagttttcatccaggtggagactatatggtaatg
ggcaccaatagcccaatcataaggttttatgatgtaaatacagttcaatgttatgtttgt
tcagttcctagtcatcaacatactggtcctgttacatcaataaagtatgaaccaggtgcc
aagtattttgtatcttctagtcgagatggttcaattaaattgtgggacggtatatctaat
aaatgtgttaacacatttgaaaaagcacataatggtagtcaagtgtgttctgtgacattt
acaagaaatggaaagtacatcttatcatcaggcaaagattctttagtgaaactttgggaa
ttatccactagtagatgtctgattgaatatactggagctggaacaactggaaaacaagta
catcgtacgcaagcattttttaatcatactgaggagtatgtcatgtttccagatgaagtc
actacatctttgtgtgcatggaatgcacgcaatgcttgtcggcagcaacttttatctcta
ggacataatggatctattcgttcaattgtgcattctccaaattcagcagcatttttgact
tgttcagacgactttagagcccgtttttggtataaaaaacacttgattggaacatag
DBGET
integrated database retrieval system
