Acyrthosiphon pisum (pea aphid): 100160269
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Entry
100160269 CDS
T01076
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03013
Nucleocytoplasmic transport
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100160269
09122 Translation
03013 Nucleocytoplasmic transport
100160269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100160269
03041 Spliceosome [BR:
api03041
]
100160269
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100160269
Spliceosome [BR:
api03041
]
Complex C
Other components
EJC/TREX
100160269
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100160269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
RVT_3
Motif
Other DBs
NCBI-GeneID:
100160269
NCBI-ProteinID:
XP_001950767
APHIDBASE:
ACYPI001580
UniProt:
A0A8R1W5X0
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All DBs
Position
A1:complement(112694788..112700188)
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AA seq
656 aa
AA seq
DB search
MMSVSKFREELKNILIEPNTTTITSIKKIVHENNYFNLSDADRRSILDQVLRCYVLDIVL
SKPPNLYDVCKMWTSFTIELVRNEMCTAIMPVVILSDMFDVTTMDVCEKMFDHVESNVNV
LKEPQFFMACKNNLLRMCNDLLRRLSRSRNTVFCGRILLFLAKFFPFSERSGLNIVSEFN
LENVTEYLNENHFDQTECMPDSIPEDEAKSDIVIEKVNVDKNLYLKFWSLQDYFRNPNQC
YKTEHWKLFISHTDFIFSTFQSHKLEHVNRMDNESAEQNMHYFPKYLTNQKLLELQLSDV
NFRRYILIQFLLLFQYLDAPVKFKLDNFKIKPEQQEWIKNSITTIYELINNTPPDGVRFS
EVVKNILQREEQWNKWKNDGCPEVTKRLPTSDQSDMPSPKRRLRRNLGDVIKNMTANNKV
FLGDPDLTKLWNLKPDNLEACKGPERDFLPSFDSFFQEAFEQLDPELCIESQYKKVNDGN
FGWRALRLLARKSPHFFAQSNNPIHKLSEYLENMIKKTMSKEKIPINQGSDKHVSPNKEF
KKESVIESEEVDISEGIQDENENENNIEVEDKNKIPKQIIDQVAAAIGEKWNILAEKLGY
QPDEIEFVKTIKTTPLDQATYLLEVWVEDAENPKPENLIYILEEIQLIEAANILKS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgttagtaaatttcgtgaagaattgaagaatattcttatagaaccaaatacc
acaacaattacttctattaaaaaaattgtacatgaaaacaattatttcaatcttagtgat
gcagatagacgttcaatactagatcaagttttaagatgttatgttttagacatagtatta
tcaaaaccaccaaatttatatgatgtttgtaagatgtggacatcatttacaattgaactt
gtacgaaatgaaatgtgtactgctataatgccagtagttatattgtcagatatgtttgat
gtgactactatggatgtttgtgaaaaaatgtttgatcatgtggaatctaatgtaaatgtt
cttaaagagcctcaattttttatggcatgcaagaacaatttattacggatgtgcaatgat
cttttacgtcgtttatccagatcacgaaatacagtcttctgtgggcgtattttattattt
ttggccaaattttttcctttctctgaacgctcaggtctcaacattgtaagtgaatttaat
ttagagaatgtaacagaatatttgaatgaaaatcattttgatcaaactgaatgtatgcca
gattcaattcctgaagatgaagctaaatcagatattgtaattgaaaaagtgaatgtcgat
aaaaatctttatttaaaattttggtcattgcaagattactttaggaatcctaatcaatgt
tacaaaacagaacattggaaattgtttatatctcatacagatttcatattttcaactttt
caaagtcataagttggaacatgttaaccgaatggataatgaaagtgccgaacaaaatatg
cattactttccaaaatatttgacaaatcaaaaattattagaattgcaattaagtgatgta
aattttaggcgttacattcttatacaatttttattgctgttccagtatttagacgctcct
gtcaaatttaaacttgataatttcaagattaaaccagaacaacaagaatggattaaaaat
tctattactactatatatgaactaattaataatacaccacctgatggtgtcagattctct
gaagtagtaaagaatatattacagagagaagaacaatggaataaatggaaaaacgatggt
tgtccagaagtaacaaaaagactacctacaagtgatcaaagtgatatgccttcgcccaaa
cgaagacttagaagaaatttaggggatgttataaaaaatatgacagctaataacaaagtt
tttcttggagaccctgatttaaccaagctatggaatttaaagccagataatttagaagct
tgtaaaggaccagaacgagattttttaccatcatttgattcatttttccaggaagcattt
gagcaattggatccagaattgtgtattgaaagtcaatacaaaaaagtaaatgatggcaac
tttggatggcgtgcactaagactattagctcgtaaaagtccacatttttttgctcaaagc
aataatcctattcataaattatctgaatatttagaaaatatgattaaaaaaacaatgagc
aaagaaaaaatacccatcaaccaaggttcagataagcatgtatcaccaaataaagaattt
aaaaaagaatctgtaattgaatcagaagaagttgatatctctgaaggaattcaagatgag
aatgaaaacgaaaataatatagaagtggaagataaaaataagattcctaaacaaattatt
gatcaagttgcagctgcaataggagaaaaatggaatatacttgctgaaaaacttgggtac
cagccagatgagattgagtttgtgaaaacaataaaaactacacctttagatcaagccaca
tatttactggaagtgtgggttgaagatgcagaaaatcccaagcctgaaaaccttatttat
attctagaagagattcaattaattgaagcagcaaatatcctcaagtcataa
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