Acyrthosiphon pisum (pea aphid): 100160275
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Entry
100160275 CDS
T01076
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03013
Nucleocytoplasmic transport
api03015
mRNA surveillance pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100160275
09122 Translation
03013 Nucleocytoplasmic transport
100160275
03015 mRNA surveillance pathway
100160275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100160275
03041 Spliceosome [BR:
api03041
]
100160275
03009 Ribosome biogenesis [BR:
api03009
]
100160275
03012 Translation factors [BR:
api03012
]
100160275
Enzymes [BR:
api01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100160275
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100160275
mRNA cycle factors
Stress granule specific factors
100160275
Spliceosome [BR:
api03041
]
Complex C
Other components
EJC/TREX
100160275
Ribosome biogenesis [BR:
api03009
]
Eukaryotic type
90S particles
Helicases
100160275
Translation factors [BR:
api03012
]
Eukaryotic type
Initiation factors
eIF-4
100160275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_22
AAA_30
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
100160275
NCBI-ProteinID:
XP_001951491
APHIDBASE:
ACYPI001585
UniProt:
A0A8R2AED1
LinkDB
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Position
X
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AA seq
401 aa
AA seq
DB search
MAVRRTGLLTEDLSHVEFETSEDVEVLTTFDNMKLREDLVRGIYSYGFERPSAIQQRAIK
PMIKGRDVIAQAQSGTGKTATFSIAMLQSIDSQLRDTQVLCLSPTRELAVQIQKVVLALG
DYLNVQCHACIGGTNLGEDLRKLDFGQHIVSGTPGRVFDMIRRKALRTRNIKTLVLDEAD
EMLNKGFKEQIYDVYRFLPPATQVILISATLPHEILEMTNKFMTDPIRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCSTKRKVDWLTEKMRESNFTVSSMHGD
MPQKERDAIMKEFRAGQTRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
FGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcagacgtacaggacttctgaccgaagatttatcgcacgtcgagttcgaaacc
agcgaagatgtcgaagtactcacgacgttcgataatatgaagcttcgggaagacttggtt
cgtgggatatactcgtacggttttgaacgtccatcagctatccaacaaagagccattaag
ccaatgatcaaggggcgcgatgtcattgctcaggctcagtcaggaactggtaaaacggct
acattttctattgcgatgttacaatctatagacagccagttgagagacactcaagtgcta
tgtttgtcaccaacccgagagcttgctgtacaaatccaaaaggttgttctagcattgggc
gattatcttaatgttcaatgccatgcttgcattggtggtactaaccttggagaagactta
aggaaattggactttgggcaacatattgtttctggtactcctggacgtgtgtttgatatg
attagacgcaaagcattgcgtactcgcaatattaagacattggtgttggacgaagctgat
gaaatgttaaataaaggattcaaagaacaaatatatgacgtttatcgtttcttgccacct
gctactcaagttattctaatatcagccactttaccgcatgaaatattagaaatgacaaac
aaatttatgactgatccaataagaatcttagtaaaacgtgatgaattgacacttgaggga
attaaacagttctttgtagctgtcgaacgggaagaatggaaattcgacactttgtgtgac
ttgtatgatacacttactataactcaagccgttattttctgcagtactaagaggaaggtg
gactggttgacagaaaaaatgagggagtcaaatttcacagtaagttcgatgcacggagat
atgccacaaaaagaaagagatgctataatgaaagaatttcgtgctggacaaacgagagtt
ttgattacaaccgatatttgggctcgcggaattgacgtacaacaggtttctttggttata
aattatgatttgccaaacaaccgtgaattgtatatacacaggattggccgttctggaaga
tttggtcgcaaaggtgttgcaataaattttgttaaaagtgatgacataaggatcttgcgt
gatattgaacaatattactccacacaaattgatgaaatgcccatgaatgttgctgatttg
atatga
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