Acyrthosiphon pisum (pea aphid): 100160474
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Entry
100160474 CDS
T01076
Name
(RefSeq) DNA-directed RNA polymerase II polypeptide-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03020
RNA polymerase
api03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100160474
09124 Replication and repair
03420 Nucleotide excision repair
100160474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
api03021
]
100160474
03400 DNA repair and recombination proteins [BR:
api03400
]
100160474
Transcription machinery [BR:
api03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100160474
DNA repair and recombination proteins [BR:
api03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100160474
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
100160474
NCBI-ProteinID:
NP_001156090
APHIDBASE:
ACYPI001769
UniProt:
C4WTK3
LinkDB
All DBs
Position
A2:79885285..79886391
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AA seq
273 aa
AA seq
DB search
MPYANQPSVHISELTTDSIKFQIEDTDLSVANSLRRVFIAETPTLAIDWVQLDCNSTVLS
DEFIASRIGLIPLTSDEIVDRLQYSRDCTCSDFCHDCSVEFNLHVKCSEEMTRHVTTADL
VSNNPRVVPVTSRNQDSDINEYGEKDDILIIKLRKGQELKIRAFAKKGFGKEHAKWNPTT
GVSFEYDPDNTMRHTLFPKPDEWPKSEYSELNEDQHEGLYNWRAKPNKFFFNVESCGSLK
PENIVLMGVAALKNKLSNLQTQFTQEMDALAIN
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaatcaaccttccgtacatatatctgaactgactactgactcaattaaa
tttcaaattgaagacactgatcttagcgttgcgaatagcttgcgtagagttttcatcgca
gaaacaccgacattagccattgattgggtccagctggattgtaattcaacagtgttaagt
gacgagtttatagcgtcccgtattggtcttataccattgacatccgatgagatagtcgat
cgccttcagtactccagagactgcacatgctcagacttctgtcacgactgcagtgtagaa
ttcaacttacatgttaaatgttcagaagagatgacaagacacgtaactactgcagatttg
gtgagcaataatccacgcgtagtaccagttacttcaaggaaccaagatagcgatattaat
gaatatggtgaaaaagatgatatactaattattaaattgcgtaaaggacaagaattaaaa
attagagcatttgctaaaaagggatttggcaaggagcatgctaaatggaatcctactaca
ggtgtaagctttgaatatgacccagacaacacaatgcgacacacattgttcccaaagcca
gatgaatggcctaaaagtgaatattcagaacttaatgaagatcagcatgaaggactatac
aactggagagcaaaaccaaacaagtttttcttcaatgtagaaagctgtggatcattaaag
cctgaaaatattgttttaatgggagttgctgctcttaaaaataaactatcaaacctccaa
actcaattcacacaagaaatggatgcacttgctataaattaa
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