Acyrthosiphon pisum (pea aphid): 100160866
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Entry
100160866 CDS
T01076
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03030
DNA replication
api03410
Base excision repair
api03420
Nucleotide excision repair
api03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100160866
03410 Base excision repair
100160866
03420 Nucleotide excision repair
100160866
03430 Mismatch repair
100160866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
api03032
]
100160866
03400 DNA repair and recombination proteins [BR:
api03400
]
100160866
DNA replication proteins [BR:
api03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100160866
DNA repair and recombination proteins [BR:
api03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100160866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
Rad17
AAA_14
RuvB_N
AAA_22
nSTAND3
AAA_18
Zeta_toxin
NTPase_1
AAA_5
AAA_17
AAA_7
AAA_30
RCF1-5-like_lid
RNA_helicase
AAA_33
AAA_16
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
100160866
NCBI-ProteinID:
XP_029347309
APHIDBASE:
ACYPI002134
UniProt:
A0A8R2JV45
LinkDB
All DBs
Position
A3:complement(36667562..36676408)
Genome browser
AA seq
837 aa
AA seq
DB search
MPKDIRSYFVKTDGSTKKKDLNNTISPHQKGKSSKKRHVLSSDDEDDVVPSTPVDKPKQK
LAEKRKLINPADVFGSEPVKQSTINVIKQKKKTQVDLLEQDFDFEWGELDNIEKQLNDSI
SNDIPISPKKSPAKSNQITPKNSPAKNDTFRTPSVSPANKRHILATPKSSSNSISTPNSS
PRKTVQSTLIPQIIKSPSASPGKLGLDNKSIKINIESPKKKLNFDNENIISKSGSKRKMS
PTKTPENKKIKISSVDSPDTQESGYTTDSSPLQSVKSNIPTGNIESKLWVEKYKPLTLKQ
IIGQTGEKSNVNKLANWLKSWYSNHGVGVNKKLTRPSPWAKDDNGAFFKAALLSGSPGVG
KTTTAHLVCKELGFDIVEFNASDTRSKKQLQNNVSELLSSTSLSPFLGGKSVTKKHALLM
DEVDGMAGNEDRGGVQELIILIKNAKCPVICMCNDRNHPKIRTLSNYCFDLRFHKPKLEQ
IKAAMMSICYKEKLKISPETLSSIIASTDNDIRLTLNHLSVVAAGKDNLNINKKYIKMGP
WDVVRKVFSAEEHKSMNITDKCDLFFYDYNISPLFVQENYLAAVPHDVEGSKWKTFERYS
LAADSIRIGDIVSAKIRSTNNWSLLPAQAIFSSYCPGEFLRGHVSKQINFPAWLGKFSKG
NKMNRLLQELQIHTRIRLSASKEAINLDYLTTLRNKILKPLIDEGSDGVHKSLDFMNHYH
LVKDDVESLNELSSWPGHKDLMSDIPAKVKSAFTRAYNKSAPTFNVTKKNKKAVDDVEGL
VDEHEVDDNVSDEDEEDIANDALISIVKKKASKKAASPAPDKKIKNSGGSGRGKKKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagatataagatcatattttgtaaaaactgatgggagcaccaaaaaaaaagac
ttaaataatacaatatcaccacatcagaaaggaaaatcatcaaaaaaacggcatgtatta
tcgagtgatgatgaagatgatgtagtaccttcgacaccagttgataaaccgaaacaaaaa
ttagctgaaaaacgaaaacttataaacccagctgatgtttttggttcagaaccagtaaaa
caaagcaccatcaatgtgataaaacaaaaaaaaaaaacccaagttgatctgcttgaacaa
gattttgattttgaatggggagaattagacaacattgaaaaacaactcaatgactcgatt
tcaaatgatattcctatatctcccaaaaaatctcctgctaaatcaaatcaaattacacca
aaaaattctcctgctaaaaatgatactttcagaacaccctcagtatcaccagctaataag
agacatattcttgcaacacccaaatcatcatccaactctatttcaactcctaattcatct
ccaagaaagacagttcaatccacactaatacctcaaatcataaaaagcccatcagcatca
ccaggaaaattgggacttgacaacaaatcaattaagatcaacattgaatctccaaaaaaa
aaactaaattttgataatgaaaatataattagtaaatcaggttctaaaagaaaaatgtca
cctactaaaacaccagaaaacaaaaaaataaaaattagttcagtagattctcctgacacc
caagaaagtggatatacaacagattcatctcctttgcagtctgttaaatctaatatccct
acaggcaatattgaatcaaaactttgggtggaaaagtataaaccattaacattaaaacaa
attattggtcaaacaggtgaaaaaagtaatgttaataaactggcaaattggttaaagtct
tggtattcaaaccacggagtaggggtcaataaaaaattaactagaccaagtccttgggca
aaagatgataatggagcttttttcaaagctgctcttctctctggttctcctggtgtagga
aaaacaacaacagcacatttagtttgtaaagagttgggttttgatattgtagaatttaac
gcttctgatacaagatccaagaaacaattacaaaataatgtgtctgaacttttatcttca
acttctttgagtccctttttgggtggaaaatctgtgactaaaaagcatgcactattaatg
gatgaggttgatggtatggcaggaaatgaagatcgaggtggtgtacaagagttaattatt
ttaattaaaaatgctaaatgcccagttatatgtatgtgtaatgatcgtaatcatccaaaa
atacgtacattgtctaactattgttttgatttacgatttcataaaccaaaattggaacag
attaaagctgctatgatgagtatatgttacaaagaaaaattaaaaatttctccagagact
ttatcttcaattattgctagtacggataatgatattagattaacactcaatcatttgtca
gttgtcgctgctggaaaagataatttaaacataaacaaaaaatatattaaaatgggtcca
tgggatgttgtgcgaaaagttttttctgctgaagaacacaaatcaatgaacatcactgat
aaatgtgatcttttcttttatgattataacatatctccattatttgttcaagaaaattat
ttagctgccgttcctcatgatgtcgaaggttctaaatggaaaacatttgaacgttattca
ttagcggcagacagtatacgaataggagacatagttagtgcaaaaattagatctaccaat
aactggagcttactccctgcacaagctatattttctagttattgccctggagaatttctg
agaggtcatgtgagtaaacaaattaacttccctgcttggctagggaaattttccaaggga
aataaaatgaacagacttttacaagaattacaaattcatacgagaataagattatctgca
agtaaggaagcaataaatcttgattacttaaccactctaagaaataagattctcaaacct
cttattgatgaaggcagtgacggtgttcataaatctttagattttatgaatcattatcat
ctagttaaagatgacgtggaatctcttaatgaactatcttcatggcctggccataaagat
ctgatgtctgacatcccagctaaagtgaaaagtgcatttactagagcatataataaaagt
gcaccaaccttcaatgtaacaaaaaagaataagaaagctgtagatgatgttgaaggtttg
gtagatgaacatgaggtagatgataatgttagtgatgaagatgaagaagatattgcaaat
gatgccttgatttcaattgtgaagaaaaaagccagcaagaaagcagcatcgccagctcct
gataagaaaatcaaaaatagtggtggtagtggcaggggtaaaaagaagaagtag
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