Acyrthosiphon pisum (pea aphid): 100161038
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Entry
100161038 CDS
T01076
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
api03041
]
100161038
Enzymes [BR:
api01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100161038
Spliceosome [BR:
api03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100161038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
100161038
NCBI-ProteinID:
XP_001943847
APHIDBASE:
ACYPI002294
UniProt:
A0A8R1W1K6
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Position
A3:38203449..38208642
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AA seq
889 aa
AA seq
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MPVSEYSKDSDRTTDVQTHDQTPFDAIITGHPLILKGLSDCGFTNASPIQVAALPTIIAG
HDTIVEAKNGTGKTLTFVIPTLMRLKLEQVHLQTIILAPTREIAVQIQQCFKKVGQHLPE
LKCEYFIGGTPVDVDKEKAKCCQIAVGSPGRIKHLINEHVLKCSEVKSFILDEVDRLVTD
KSFTKDVRLIDAKLPKLKQTIVVSASIDKNDMSVFDEFMTEYIVVKGAEEDMNALQDPSK
FLLGIKQYVACVKAVSTNIILLPAKNVRLLNILQNLQYTQCIIFTNYMTRVEAVCNMLRD
HNYKADYIRGDQDQSIRLELVDRLTSFKSKILVATDLIARGIDSSNVDLVINMDCPNDWA
TYLHRIGRAGRFGNKGNAFTILDDDKELKTFKNIINSIESIKVKMLPIAITKPILEYADN
ELEDLNLTTEPEISPIQETGNNVIEDNLAKYSESDSNSSPNVIESNINSISEECQPCPER
KSVYGYGVSEKESLQKLCKVVKETEKKLIEDNMVDKRLLTEDRSFVLFDPEPFLEDTDQY
PEYSPDELLEIITKYDSDFEKYEADKNRMLKNTVLQTVSENEHSNTNQVCEENDFTNLSN
ITDKKINDIHTDQQLQSQHDAQINCEDKKQFVNEVCSESNFSSNSNNSVDDTKIDTNNSQ
RLRFTDIYSLFEIPDFSLLKPAQHDSEVAHSTDVGESDVSTSIICEKGSDDEELLEEESC
GEEEEYSEEGDEEEDNCDEEESCEEEESCDEEEYCDAEESCVTEESCDEEEYHVKQENRY
EEHSDGKKEYEEEINLEAENKIFDEDITNKNGSYDDHLDNRGIYFVKHNNKSKQKSLCNN
IQEYNIPKREEEIIENNDQQIVDYEILNDWYSQWKQQMSRIQTFVRMSK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtccgaatattcgaaagactctgaccgaaccacagatgtacagacacacgat
cagacgcctttcgacgccataataacgggccatccacttatattgaaaggtctatctgat
tgtgggttcacaaatgcttctccgatacaagttgccgctctaccgacaatcatcgcagga
catgacacaatagttgaagcaaaaaatggaacaggaaagacattaacttttgttataccg
actttgatgagactgaaattagaacaggttcatttacaaactattattttggcaccaaca
cgagaaatcgctgtccaaatacaacagtgtttcaaaaaagtcggacagcacttaccagaa
ctgaaatgtgaatatttcattggcggtactccagttgatgttgacaaagagaaggcaaag
tgctgtcaaatagctgttggttccccgggacgtatcaaacacctaatcaatgagcacgtg
ttaaaatgttcagaagtaaagagctttatacttgatgaagttgatagattagttactgac
aaaagttttacaaaagatgttcgactgattgatgctaaacttccaaaactaaagcaaaca
attgttgtaagcgcatcaattgataaaaatgatatgtctgtcttcgatgagttcatgacg
gagtatattgtggtcaagggagcagaagaagatatgaatgctttacaagacccatcaaag
ttcctattaggtattaagcaatatgtagcatgtgttaaagcagtcagtactaatataata
ttattacctgcaaaaaatgtgagactcctcaatatattacaaaatttgcaatatactcaa
tgtatcatatttactaattacatgacaagagttgaagctgtttgtaatatgctacgcgac
cataactataaagctgattacattagaggtgatcaagatcaaagtattcgattggagttg
gtagatagattaacatcttttaaatcaaaaatacttgttgccacggatttaatagccaga
ggaatagattcgtcaaacgtagacctggtgattaatatggactgtccaaatgactgggct
acatatttacacagaattggccgagctggaagatttggaaacaaaggaaatgcttttaca
atattggacgatgacaaagagttgaaaacttttaaaaatattattaacagtattgaaagt
attaaggtcaaaatgttaccgattgcaattacaaaacctatacttgaatatgcagacaat
gagcttgaagatcttaatttaacgactgaacctgaaatttcaccgatacaagaaactgga
aataatgtaattgaagacaacttagcaaaatatagtgaaagtgattctaactcaagtcct
aatgtcattgaatcaaatatcaacagtatatctgaagaatgtcaaccatgtcctgaaaga
aaatctgtttatgggtatggtgtgtctgaaaaggagtcacttcaaaagctatgtaaagtc
gttaaagaaaccgaaaaaaaactcatcgaagataatatggttgacaaaagactcttaact
gaagatagatcgtttgtgttatttgatccagaaccctttcttgaagacactgatcaatat
ccagaatatagtcccgatgaactattagaaattataacaaaatatgattcggattttgaa
aaatatgaagctgataaaaaccgaatgttaaaaaacactgtactccaaaccgttagtgaa
aatgaacactctaatactaatcaagtgtgtgaagaaaatgattttacaaatttgtccaac
attactgataagaaaataaatgatatacatacagatcaacaattacaaagccaacatgat
gctcaaattaattgtgaagacaaaaagcaatttgtcaatgaagtatgttcagaaagtaac
ttttcaagtaattcaaacaacagtgttgatgacactaaaattgatacaaataatagtcaa
agattacgattcactgatatatatagtttatttgaaataccagattttagccttttaaag
cctgcacagcatgatagtgaagttgcacattcgacagatgtaggagagagtgatgtatca
acaagtataatatgtgaaaagggtagtgatgatgaagaattgttggaagaagaaagctgc
ggagaagaagaagaatatagtgaagaaggagatgaagaagaagataactgtgatgaagaa
gaatcctgtgaagaagaagaatcctgtgacgaagaagaatactgtgatgcagaagaatcc
tgtgttacagaagaatcttgtgatgaagaagaataccatgttaaacaagaaaatcgctat
gaagaacatagtgatggtaaaaaagaatatgaggaagaaattaatttagaagcagaaaat
aaaatatttgatgaagatattacaaataaaaatggctcttatgatgatcatctcgacaac
cgtgggatatattttgtgaaacacaacaataaatctaaacaaaagtcactttgcaacaat
atccaagaatataatatacctaaaagagaagaagaaattattgaaaacaatgatcaacaa
atagtggattatgaaattttaaatgactggtatagccagtggaaacagcaaatgagtcgc
atacaaacatttgtcaggatgagtaagtga
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