Acyrthosiphon pisum (pea aphid): 100161048
Help
Entry
100161048 CDS
T01076
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
api03009
]
100161048
Enzymes [BR:
api01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100161048
Ribosome biogenesis [BR:
api03009
]
Eukaryotic type
90S particles
Helicases
100161048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HEM4
P-loop_SecA
AAA_30
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
100161048
NCBI-ProteinID:
XP_001950933
APHIDBASE:
ACYPI002303
UniProt:
A0A8R2ABL2
LinkDB
All DBs
Position
A1:complement(60694783..60701975)
Genome browser
AA seq
528 aa
AA seq
DB search
MDSFDIFKKLSVGAKFKKPEKIAIHPEDDKSTAKQIKVKTVGDRVPEALSTFDMMKEAYS
LSPVLMENLKNSGYTVPTPIQTQAIPVMLQKRQIFACAPTGSGKTAAFLVPIIHHLNKPL
NKGFRALIVSPTRELAKQTLRECTRLCEGIGLRAHTFTKINKDKEKFNPKLAQKFDILIA
TPNRLVFLLQQEPPAVELNNIEWLIIDESDKLFETGVRGFRDQLAIIYKACGPNAKRAMF
SATYTVEVAKWSKKNLDGLIAVTVGNRNTTTTMVEQELVFVGNEEGKLIAMRDLVKKGLS
PPVLIFLQSKERAKELFSELIYDGINVDAIHADRTQQQRDNTVKAFREGKIWVLICTELM
GRGIDFKGVNLVVNYDFPSSAISYIHRIGRTGRAGRSGKAVTFFTNDDKPMLRSIATVMR
DSGCPVPDYMLEMKRLHKNTRRKLEKQSIDRNEIRAKPHRYHKPNADIKDPASSKSKKES
NDKSKKVKVKKNLVSIINVDQTSKVDKKRKLNVSKERKVVKKTKKSSV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggactcttttgacatattcaaaaagctgtccgttggcgcaaaattcaaaaaaccagaa
aagattgcgattcaccccgaggatgacaaatccactgcgaaacagattaaagtcaaaacg
gtcggcgatcgtgttcctgaagcgctttcaacttttgacatgatgaaagaagcctattct
ttgagtccagtgttgatggaaaatctcaaaaattctggttacactgtgccaacgcctatt
cagactcaggctatcccagttatgttgcagaaaaggcaaatatttgcatgtgcaccaacc
ggctctggaaaaactgcagcgttcttagtacctatcattcatcatttaaataaaccatta
aataaaggatttagagccttaattgtgagtccaacaagagagttggcaaaacaaacatta
agagaatgtacaagattgtgtgaaggaattggactacgagcacatacatttaccaaaatt
aataaagacaaagaaaaatttaacccaaaattagcacaaaaatttgatatcttaatagca
acacctaatcgacttgtgtttctactgcaacaagaaccaccagctgttgaacttaacaac
attgagtggttaataatagacgaatctgacaaattgtttgaaactggagttcgaggtttt
agagaccaattagcaataatttataaagcttgtggtccaaatgctaaacgcgccatgttc
agtgctacgtatacagtagaagtggcaaaatggtcaaagaaaaatcttgatggtcttata
gcagtaacagttggtaataggaacactactaccacaatggtcgaacaggaactagtattt
gttggcaacgaagaaggaaaattaattgcgatgagagatttagtgaaaaaaggtctatca
cctccagtcttgatatttttacaatctaaagagcgagcaaaagaacttttcagtgaacta
atttatgatggaattaatgtagatgctatacacgctgatagaactcaacaacaaagagac
aacacagtaaaggcctttcgagaaggaaaaatatgggttttaatttgtacagagcttatg
ggccgaggtatcgatttcaaaggtgtaaatttggtggtaaattatgactttccatcttca
gccatctcatatattcatagaattggtaggacaggacgagcaggacgttctggtaaggct
gttacattttttacaaatgacgacaaaccaatgttaagaagcattgccacggtgatgagg
gattcaggatgtccagtaccagactatatgttagaaatgaaacgattgcataagaacacc
agaagaaaattagaaaaacagtctattgatagaaatgaaattagagcaaaaccacataga
tatcataaacctaatgcagatataaaagatccagcatcatctaaatcaaagaaagaatca
aatgataaaagtaaaaaagtaaaagtaaaaaaaaatttagtgtcaattattaatgttgat
cagacttctaaagtagacaagaaacgaaaattaaatgtttccaaagaacgtaaagttgta
aagaaaactaaaaagtcatctgtgtaa
DBGET
integrated database retrieval system
