Acyrthosiphon pisum (pea aphid): 100161477
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Entry
100161477 CDS
T01076
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL-like isoform X6
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03460
Fanconi anemia pathway
api04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100161477
09124 Replication and repair
03460 Fanconi anemia pathway
100161477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
api04121
]
100161477
03400 DNA repair and recombination proteins [BR:
api03400
]
100161477
Enzymes [BR:
api01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100161477
Ubiquitin system [BR:
api04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100161477
DNA repair and recombination proteins [BR:
api03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100161477
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d2
SLX1_C
PHD_NSD
zf-RING_2
clamp_Gag1-like
Motif
Other DBs
NCBI-GeneID:
100161477
NCBI-ProteinID:
XP_008182590
APHIDBASE:
ACYPI002696
UniProt:
A0A8R2D4F2
LinkDB
All DBs
Position
X:complement(85714855..85725213)
Genome browser
AA seq
337 aa
AA seq
DB search
MDVYNYVNVKQKTHSLPEFLKELIPVLVKVWKQDTSINVPNSSYIFNEEKFHSVIQEVNL
YGQYVHTIDENLKHITFNVLDMCKHSHFIKIFIPDEYPMIKKQPLCFETMVPSVSLNLFL
KMTTILNLFETFKNVVNELSNFWNVHNEIISTCNPIGSYTFRDVNYRIPIGLGCCNILLD
IHVCVEVEVDPLNPLNCPKFHLHGRPASMEKFQKRLNEINPILIWSTENSFKENILNVFE
VPTLQSQYEEEKPEHYIASQNDLNCCCICYDQLDMALKNQTKSCVNEKCDALYHMSCICE
WLLNSGSTPMFEHLQGKCPQCEEDMLVALENFDLIKT
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatataactatgtaaatgttaaacaaaaaacacattcattgccagagttttta
aaggaattaattccagttttggtaaaagtttggaaacaagatacttctataaacgtgcca
aattcaagctatatatttaatgaagaaaagttccattctgtaattcaagaagtcaattta
tatggtcaatatgtgcatacaattgacgaaaacctaaaacacataacttttaatgtttta
gatatgtgtaagcacagccattttataaaaatttttatacctgatgaatatcccatgatt
aaaaaacaaccattatgttttgaaactatggttccatcagtaagcttgaacttgtttttg
aagatgaccactattttaaacttattcgaaacgtttaaaaatgttgttaatgaattaagc
aatttttggaacgtgcacaacgaaattattagcacttgcaatcctataggatcttatact
tttagagatgttaattatagaatacctattggtttaggatgttgtaacattttattagat
attcatgtatgtgttgaagttgaagttgatccattgaatccattgaactgtcctaaattt
catcttcatggtcgcccagcttctatggagaagtttcaaaaaagattaaatgaaatcaat
ccaattttgatttggagtaccgaaaacagttttaaagaaaatattttgaatgtatttgaa
gttcctactcttcagtcacaatatgaagaagagaaaccagaacattatattgcaagtcaa
aatgatttgaattgttgttgtatatgttatgatcaattagatatggctttaaaaaaccaa
accaaatcgtgtgttaatgaaaaatgtgatgcattatatcatatgtcatgtatttgtgag
tggttgctgaattctggtagtacaccaatgtttgaacatttgcaaggcaaatgtcctcaa
tgtgaagaagacatgctggtagctctggaaaattttgatttgattaaaacttga
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