KEGG   Acyrthosiphon pisum (pea aphid): 100161938
Entry
100161938         CDS       T01076                                 
Name
(RefSeq) ATP-dependent RNA helicase WM6
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03013  Nucleocytoplasmic transport
api03015  mRNA surveillance pathway
api03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100161938
  09122 Translation
   03013 Nucleocytoplasmic transport
    100161938
   03015 mRNA surveillance pathway
    100161938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100161938
   03041 Spliceosome [BR:api03041]
    100161938
Enzymes [BR:api01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100161938
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100161938
Spliceosome [BR:api03041]
 Complex C
  Other components
   EJC/TREX
    100161938
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100161938
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 Utp25_C P-loop_SecA
Other DBs
NCBI-GeneID: 100161938
NCBI-ProteinID: XP_001942765
APHIDBASE: ACYPI003124
UniProt: A0A8R2A3T2
LinkDB
Position
A1:complement(70019303..70021738)
AA seq 423 aa
MADADDLLDYEEDEQNETVESDDKKQAKKEVKGNYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAMLGMDILCQAKSGMGKTAVFVLSTLQQLEVYESEVYALVLCHTRE
LAFQISKEFERFTKYLPAVKVSVFFGGVPITKDEDTLKNNKPHVVVGTPGRILELIRKKK
LVLNNLKHFILDECDKMLEILHMRSDVQEIFKNTPFNKQVMMFSATLSKDIRPVCKKFMQ
QPLEVYVDDDAKLSLHGLQQYYVKLTEKEKNKKLFDLLDELEFNQVIIFVKSVQRCVVLT
ELLNEQNFPSVAMHGGMSQQDRLKFYQEFKDFQKRILVATNLFGRGMDIERVNIVINYDM
PEDTDTYLHRVARAGRFGTKGLAITFICEETDAKVLNSVQDRFDVTIGRMPNEIELSSYV
ERK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggcagatgctgatgatcttttagactacgaagaagacgaacagaacgaaaccgtcgag
agcgatgacaagaaacaagccaagaaagaagtaaagggtaactatgtttccatacacagt
tcaggtttccgtgatttcctcttgaaaccggaaatactgagagcaatcgttgactgtggt
ttcgaacatccgtctgaagtgcagcatgagtgtataccacaagctatgttgggcatggat
attctatgccaagccaagtccggtatgggtaaaacagccgtgtttgtcttatccacctta
cagcagttggaagtgtacgagagtgaggtatacgctctggtcttatgccacaccagagaa
ttggctttccagataagcaaagaatttgagcgcttcactaaatacttgccggcagtcaag
gtcagtgttttctttggtggtgtgcccatcacaaaagacgaagatacactaaagaacaac
aagccacacgtagtggtaggcacaccaggtcgcatactagaactgatcagaaaaaaaaaa
ttggttcttaataatctaaagcatttcattttggatgagtgtgataaaatgttagagatc
ctacacatgcgaagtgatgtccaagaaatatttaagaacactccgtttaacaaacaagta
atgatgttcagtgccacacttagcaaagatatacggcctgtctgtaaaaagtttatgcaa
caaccattggaagtatatgttgacgatgatgccaaactatcattacacggcctccagcag
tactatgtcaaactcactgaaaaggaaaaaaataagaaattgtttgatcttctcgatgaa
ctagaattcaatcaggttatcatttttgttaaatctgttcaacgttgtgtagttttaaca
gagctactaaatgaacaaaatttcccatctgttgccatgcatggtggtatgtctcagcaa
gatcgattaaagttctaccaagagttcaaagattttcaaaaacgaatattagtggctacc
aatttgtttggtcgaggaatggatattgaacgagtgaacattgttataaactatgacatg
cctgaagacacagacacttatctacatagagtggcaagagcgggacgctttggtaccaaa
ggattagcaattacattcatttgtgaagaaactgatgcaaaagttttgaatagtgttcaa
gataggtttgatgtcaccattggtcgaatgcctaatgaaattgagctcagttcttacgtt
gagagaaaataa

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