Acyrthosiphon pisum (pea aphid): 100162037
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Entry
100162037 CDS
T01076
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03008
Ribosome biogenesis in eukaryotes
api03013
Nucleocytoplasmic transport
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100162037
03015 mRNA surveillance pathway
100162037
03008 Ribosome biogenesis in eukaryotes
100162037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100162037
03009 Ribosome biogenesis [BR:
api03009
]
100162037
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100162037
mRNA cycle factors
Stress granule specific factors
100162037
Ribosome biogenesis [BR:
api03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100162037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
Tap-RNA_bind
NTF2
LRR_4
Motif
Other DBs
NCBI-GeneID:
100162037
NCBI-ProteinID:
XP_001944760
APHIDBASE:
ACYPI003218
UniProt:
A0A8R1W3C4
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All DBs
Position
A3:20030383..20037558
Genome browser
AA seq
775 aa
AA seq
DB search
MAGRSRGRNSSGRFHNANPRGERSNEHDDRTSRPSTSRGGGGYSDRHGFNKKVTFKANQR
GGNHFRKSWESKTDLVRDQLDMEFPNRNGPSRNTTGRRSFPERNHGRGGNGNFRNLSWAL
KESSTGWYSVFVPNVEDCDEVLKIIQTYITPVVFYPYNKQYFDNALRFLVDDFKVAKTLH
NTSYKITQRDDRKLVIKVCIYLPPRGPISFTPVSSEVREKMIEAMATRYNPSTKSLDLSQ
FYACSLFTDNQLFVPLNRPAVLLAALNMVAQHTKHDLYGLSLENNHIYLGEGLIWIRRLF
PELKVLDLAGNKFSDLKELRCLSGYTIHELNLSRNPVCNTEDKERYKRDVQQFFPMLNKL
DNSELPSRYSAIVGSKFKMPINLGNSYPIPEGHNPELPNPVTTLVESFLTQYYVLYDNQV
SRQMVSEAYHENAIFTLSSCFLFKNGKGSLSQYLPESRNFLKSDRNRQGRRRFLHKGKQD
IINFLDKLPKTKHDIGSFIVDVPLATAAMVQIVVNGVFAEDFKETNFRHVYRSFCRTFCI
VPIGSGWSIISDMLFVTTVTDELLLESSKRFHVFKPKPVSSKKNNSNGNSNQNGTMFMED
TDEMAGMESSSSYQQTPTPSYPPPSYQQSTFSSYQPSPMTPPINPQQPSPYQGGMQTSTP
QIQQMAPAATDSQQQSNASFPMFNTISPSTTAFPTPSTPASLPVNQLSTEVPVNSMRDTN
ANPDKLTMIKSFSNESGMNNEWAEKCLVENGWDYAKAASCFSDLKANIPPAAFIH
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggctggtagatcacgaggacgtaacagcagcggcaggtttcataacgccaatccacgt
ggtgaacggagtaatgaacatgatgatcgaacttcaagacctagcactagtcgaggaggt
ggtggatactcagatcgtcatggttttaataaaaaggtgacattcaaagcaaatcaacgt
ggaggtaatcattttcgtaaaagttgggaaagtaaaactgatttggtccgtgatcaactg
gatatggaatttcctaatcgaaatggcccgtctagaaatactactggtcgacgatctttt
cctgaaagaaatcatggccggggtggtaatggtaatttcagaaacttatcatgggctttg
aaagaaagtagtactgggtggtattcagtatttgtgccaaatgttgaagattgtgacgaa
gtccttaaaataatacaaacttatatcacacctgttgtattttatccatacaataaacaa
tattttgataatgctttaagatttctcgttgatgattttaaagttgctaaaacattgcac
aacactagttataagataacacaaagagatgatcgaaaattagttataaaggtgtgtata
tatttgcccccacgtggtcctatatcattcacaccagtatccagtgaagtgagagagaaa
atgatagaagccatggcgactcgttacaatcctagtaccaagagtttagatttgtcacaa
ttctatgcttgttcactgtttaccgataatcaactatttgtaccattaaatcgaccagct
gttcttttggcagcactcaacatggttgctcaacataccaagcatgacttgtacggttta
agtcttgaaaacaaccacatatatttaggtgaaggtcttatatggatacgtaggttattc
cctgaactgaaagtgttggatttagctggcaacaaattttctgatttaaaagagttaagg
tgtctctccggttacactattcatgagctgaacttgtccagaaatcctgtgtgcaataca
gaggacaaagagcgttacaaacgggatgtacaacaattttttcccatgctaaacaagttg
gataactcagaactgccgtctcggtacagtgcgattgttggatccaagtttaaaatgcca
attaacctgggtaatagctatccaataccagaaggccataatcctgaactgccgaatcca
gtaacgactttagtagaatcatttcttactcaatattatgtactatacgataaccaagtg
tctagacaaatggtatcggaagcttaccatgaaaatgccatattcacgttatccagttgt
tttttatttaaaaatggtaaaggtagcttatcacagtatctacctgaaagcagaaatttt
ttgaaatctgaccgaaacagacagggaagacgtcgctttttacataaaggcaaacaagac
ataataaactttttagacaagttacctaaaaccaagcatgatattggttcattcatagtt
gatgtaccattggcaactgctgctatggttcagattgtagtgaatggtgtgtttgctgaa
gattttaaagaaaccaactttagacacgtatatcgatcattctgcagaacattctgtata
gtgccgattgggagtggttggagtataattagcgatatgttatttgtaacaacagttact
gatgagttattattagagtcttcaaaacggttccatgttttcaaaccaaaaccagtgtca
tccaaaaaaaataactcaaatggcaacagtaaccaaaatggaacaatgtttatggaggat
acagatgaaatggctggcatggaatcatcatcatcctatcaacagactcccacgcccagc
tacccaccaccatcttatcagcaatccacattttcatcttaccagccttcaccaatgacg
cctcctattaatccacagcagccatcaccttatcaaggaggcatgcagacatctactcca
cagattcaacaaatggcgcctgcagcaacagactctcaacagcagtcaaatgcctcattt
cctatgttcaacacaatatcaccttctacaacagcatttcctacaccttcaactcctgct
tccttgcctgtaaatcaattgtcgactgaagtgcctgtaaattcgatgagggacactaat
gctaatcccgataagttgactatgattaagagcttttcaaacgagtctggaatgaataat
gaatgggctgaaaagtgtttagtagaaaatggttgggattatgctaaagcggcttcatgc
ttttcagacctaaaagctaatattccacctgcggctttcatacattaa
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