Acyrthosiphon pisum (pea aphid): 100162061
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Entry
100162061 CDS
T01076
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
api03021
]
100162061
03036 Chromosome and associated proteins [BR:
api03036
]
100162061
Transcription machinery [BR:
api03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100162061
Chromosome and associated proteins [BR:
api03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100162061
SLIK complex
100162061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
100162061
NCBI-ProteinID:
XP_008187602
APHIDBASE:
ACYPI003241
UniProt:
A0A8R2FBL8
LinkDB
All DBs
Position
A1:complement(151719384..151737104)
Genome browser
AA seq
1670 aa
AA seq
DB search
MHQNVSEEESSDSDQNNENNSGSSSSSSESQSDHSVKVSQEANSSEQSTDEYSPSERPKR
VTKPSSKLSESDESSDYSSRVTKNTKWKSDTSDYDSETDKEEIPRSKSLAALRRQKQPTR
RPTIKQNPRYKRKNNSFSANSDDEDASKSRNARRRPFAVSYKEESEKSDSDDYLEREEIE
EKEEPPDTSETIEKVLAQRQGKKGVTGDVTTIYAVEEKGDPNIECDPNEKETQFLIKWKG
WSHIHNTWESMNSLLAQKVKGLKKIDNFVKREDSISAWRNQMTAEDSEYYECQLELQQDL
LKSYNIVERIIGESKNPAQKEYYVKWQSLPYSDATWEVASLIERKWPQKIKEFRDREGSK
RTPSKACKALKYRPKFVQLAEEPEYFGGYDEKLILRDYQLHGVNWLIHSWCKDNSVILAD
EMGLGKTIQTICFLYYLFHNYQMHGPFLVVVPLSTMPSWQREFSLWAPDINIVTYIGDVE
SRNIIRETEWCFESSKRLKFNAILTTYEIVLKDSLLLNSLSWAVLMVDEAHRLKNDDSLL
YKALQGFDTNQRLLITGTPLQNSLKELWALLHFIMPGKFDNWEEFEHMHDNAASKGYTKL
HRQLEPYILRRVKKDVEKSLPAKVEQILRVEMTPVQRKYYKWILTKNYNALRKGSKGSST
TFLNIMIELKKCCNHALLTKPQENENTADDNLQGLLRGSGKLMLLDKLLVRLRETGHRVL
IFSQMVRMLDILAEYLSYRHLPFQRLDGSIKGDIRRQALEHFNAEGSQDFCFLLSTRAGG
LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKGSVEEDIVERAKQ
KMVLDHLVIQRMDTTGRTVLDKKAKNASIPFNKDELTAILKFGAEELFKDDPGADEEPIC
DIDDILRRAETRDEAPTTVGDELLSAFKVASFTFDEEKDIADKSPSAQNEQENKEWEEII
PETLRKKVEDEEKAKEMEDLYLPPRSRKTLQKVNQGEGKSEKSKKDESDDSSYDGSDEDQ
PRKRGRPRVGTKEIVKGFTDAEIRKFIKSCKRFPNPMKRIDAVAGDADLQEKPKSELKKL
VQMLYDRCNEACNSEHTEKESDATNEDGVKKRNRGPSIKLGGVAVNAKSVLACSEELDVL
DDIIPSDEEERSKFTLDLKRVKSANFDFDWDITDDSKLLIGIYLYGLGSWEAIKIDTALG
LSDKILSNEDKKPQAKHLLARSEYLLKMLKKNQVLVKGDPKPKKARKVKEGKSREIIDDD
STDNENGNKKKIDNATNHEEKLKAKRDLINAKSGLTSSPKKEKKRKVVAKMGPMHFTANS
EPKAVNVDDIVELPKEKFLECKEKMRPVKKVLKALDDPEEKKNELRYVNHMQECLIEIGS
HIGKCLEEFKDPDKIREWRSNLWFFVSKFTEFDSKKLLKIYRRGLHTTEKLEKDNKVKDR
NKNKDKIRDKSKEDKKLQKSQMESEDSLKRKRDGDDIEKSNKKKINSNSSSGVLLTTPTS
VLTTPPSSSNSSNATRSYDQSSNRYDTNYNHHRNRSAPYSRSDNRNDTRSDNRSDTRSDT
RSDNRRFSSSRDSNTRRERYDNNYRSRPAFREREREIDSDMRMYDKIRYQQQAYAAYGQA
AAASFYAPELYGRSGSASYMGLPQYSVSTDWHPPVSEYRRDYERRPRNNS
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagaatgtatcagaagaagaatcttcagactctgatcaaaataatgaaaataat
tcaggttcatcatcatcaagttctgaaagtcaatctgatcacagtgtaaaagtgtctcaa
gaagctaacagttctgaacaatcaactgatgaatatagtccttcagagcgacctaaacgt
gtgactaaaccatcttcaaaactcagtgagagcgatgaatcgagtgattacagttctcga
gtcacaaaaaatacaaagtggaaaagtgatacctcagattatgattctgaaactgataaa
gaagaaatacctcgtagtaaatcattagctgcattacggcgtcaaaaacaacctacaaga
cgtcctacaatcaaacaaaatccacgttataaaagaaaaaataatagttttagtgctaac
agtgatgatgaagatgctagtaaatctagaaatgcacgtcgaagaccctttgcagttagc
tataaagaagaaagtgaaaaaagtgatagtgatgattatttggaaagagaggagattgaa
gaaaaagaagaaccacctgatacttctgaaacaattgaaaaagttttggctcaaagacaa
ggcaaaaaaggtgttacaggagatgtaacaactatttatgcagttgaagagaaaggagat
cctaatattgagtgtgatcccaatgaaaaagagactcagtttctgataaaatggaagggc
tggtcacatattcataatacttgggagtctatgaattcacttttggcccaaaaagttaaa
gggcttaagaaaattgataactttgtgaaacgtgaagattctattagtgcatggcgtaat
caaatgacagctgaagattctgaatattatgaatgtcaacttgaacttcaacaagattta
ttaaagagctacaatattgttgaaagaataataggagaatctaaaaatccagcccaaaaa
gagtattatgttaaatggcaatctttgccttatagtgatgcgacatgggaagtagcatca
ttaattgaacgtaagtggcctcaaaaaattaaagaattcagagatcgtgagggttcaaaa
agaacaccatcaaaagcgtgtaaagctttaaaatatcgtccaaaatttgttcaacttgct
gaagaacctgaatattttggtggttatgatgagaaattgatacttcgagattatcaatta
catggtgtgaattggcttattcattcatggtgtaaagacaattctgtaattcttgctgat
gaaatgggtctcggaaaaactattcaaactatttgttttctgtattatttatttcacaat
taccaaatgcatggtccattcctagttgttgttcctttatcaactatgccttcgtggcag
cgcgaattcagtttatgggctcctgatataaacattgtaacgtacattggagatgttgaa
tctcgtaacataatacgtgaaacggagtggtgttttgagagttctaaaagattaaaattt
aatgctattcttactacctatgaaattgttcttaaagatagtttgctattaaacagtctt
agttgggctgttttaatggttgatgaagcacatcgtttaaaaaacgatgattcccttttg
tataaagctcttcaaggttttgatactaatcagaggttacttataaccggaaccccttta
caaaacagtttaaaagaactgtgggcattgttgcatttcattatgcctggaaaatttgat
aactgggaagagtttgagcatatgcatgacaatgcggctagtaaaggttatacaaaactt
catagacaacttgaaccatatattttacgccgtgttaaaaaagatgtagaaaagtcatta
ccagccaaagttgaacaaattttaagagtggaaatgactcctgttcaaagaaaatattac
aaatggattttaaccaaaaattataatgctttaagaaaaggatctaagggatcatcgaca
acatttttaaatattatgatagaattaaaaaagtgctgtaatcatgctctgttgactaaa
ccccaagagaatgaaaacacagctgatgacaatctgcagggtttattacgaggatctgga
aaacttatgctacttgataagttattagtacgtctgagagaaactggccaccgagtattg
attttctctcagatggttcgtatgttagatattcttgctgaatatcttagctatcgacat
ttaccatttcaaagacttgatggaagcattaaaggtgatataagaagacaagctttagaa
cattttaatgctgaagggtctcaagatttttgttttctattatcaactcgagctggtgga
cttggtattaatttagccacagcagatacagttattatatttgattcggactggaatcct
caaaatgatttacaagcccaggcacgtgctcacaggattggacagaagaatcaagttaat
atttatcgactggttacaaaagggtcagttgaagaagacattgtagaaagagcgaagcag
aaaatggttctggatcatttggtaattcaacgaatggatactacgggtcgtactgtttta
gacaaaaaagcaaaaaatgcatcaattccttttaataaagatgagcttacagctatatta
aaatttggtgcagaagaattatttaaagatgatcctggagctgatgaagaacctatatgt
gatattgatgacattttgagaagagctgaaacacgagatgaagctccgacaactgtaggc
gatgaacttttatctgcctttaaagtggctagttttacttttgatgaagagaaagatatt
gctgataagtcacctagtgctcaaaatgaacaagaaaataaagaatgggaagaaataata
cctgaaacattaagaaaaaaagttgaggatgaagaaaaggcaaaagaaatggaagatctt
tatttacctcctagaagtagaaaaacattacaaaaagtgaatcaaggagaagggaaaagt
gaaaaatctaagaaagatgaatctgatgattctagctatgatggcagtgatgaagatcaa
ccaagaaaacgtggaagaccacgtgtcggaaccaaagaaatagttaaaggtttcaccgat
gcagaaattcgaaagtttattaaaagttgtaaacgttttcctaatcctatgaaacgtatt
gatgctgtagctggtgatgcagatcttcaagagaagcctaaatcagaattaaaaaaatta
gttcaaatgttatatgaccgttgtaatgaagcatgtaatagcgagcacactgaaaaagaa
tctgatgctactaatgaagatggtgttaaaaaaagaaataggggaccttcaataaaactt
ggtggtgtggcagtgaatgctaaaagtgtattagcttgtagtgaagaattagatgttttg
gatgatataataccatcagatgaagaagaaagatctaagttcactttagatttaaaacgt
gtcaaatcagctaattttgattttgattgggatataactgatgattctaaactattaata
ggaatttatctttatggcttaggttcatgggaagcaattaaaattgatactgcattaggc
ctcagtgacaaaatattatccaatgaagataaaaaaccgcaagctaaacatttattagct
cgttctgaatatctactgaagatgttgaaaaaaaatcaagtattagttaaaggtgaccca
aaacccaagaaggcacgaaaggtaaaagaaggaaaatcaagggaaataattgatgatgat
agtactgataacgaaaatggaaacaaaaagaaaattgataatgctactaatcatgaagaa
aaattaaaagccaaaagagatttaatcaatgcaaaatctggattgactagttcaccaaaa
aaagaaaaaaaacgtaaagttgttgctaaaatgggtccaatgcatttcactgctaatagt
gaacctaaggccgtaaatgtggatgatattgttgagttgccgaaagaaaaatttttagag
tgtaaagaaaaaatgagaccagtgaagaaagtgttgaaagctttagatgatccagaagaa
aagaaaaatgaattacgctatgtaaatcatatgcaagagtgtttaatagaaattggatca
cacattggtaaatgcttagaagaatttaaggacccggataaaataagagaatggagaagc
aatttatggtttttcgtctcaaagtttaccgaatttgattctaaaaaattgctaaaaatt
tatcgacgaggattacatacaactgaaaaacttgaaaaagataacaaagtaaaagataga
aataaaaacaaagataaaattagagataaatctaaagaagataaaaaactccaaaaatct
cagatggaatctgaagattcattaaaacgaaaacgtgatggtgatgatatagaaaaatca
aacaaaaaaaagataaattcaaacagtagttcaggtgttttattaaccactccaacttct
gttctaactacacctccgagttctagtaattcctccaatgctacaaggtcatatgatcaa
agcagtaatcggtatgatacaaattataatcatcatagaaataggagtgcaccctattct
aggagtgataatcgaaatgatactcggagtgataatcgaagcgatactagaagtgatact
agaagtgataatagaaggttttcatctagtcgtgactctaacaccaggcgtgaaaggtat
gacaataattatcgaagtcgtccggccttcagggaaagagaaagagagatcgactctgat
atgcgaatgtatgataaaattagatatcaacaacaagcctatgctgcatatggacaagct
gctgctgccagtttctatgctcccgaattgtatggccgctcaggttctgcatcatacatg
ggcttacctcaatatagtgtttctactgattggcatccccccgtatcagaatataggaga
gactatgaacgtagacctcgaaataattcctag
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