Acyrthosiphon pisum (pea aphid): 100162150
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Entry
100162150 CDS
T01076
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100162150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
api03021
]
100162150
03019 Messenger RNA biogenesis [BR:
api03019
]
100162150
Transcription machinery [BR:
api03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100162150
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100162150
U7-dependent histone pre-mRNA processing factors
100162150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
100162150
NCBI-ProteinID:
XP_001945120
APHIDBASE:
ACYPI003322
UniProt:
A0A8R1W1G4
LinkDB
All DBs
Position
A1:126325798..126336262
Genome browser
AA seq
694 aa
AA seq
DB search
MLSVQDKKSEEIQISEEENDKLTIKPLGAGQEVGRSCIVMEFKGKKIMLDCGIHPGLQGL
DALPFVDLIEANEIDLLLITHFHLDHSGALPWFLLKTKFKGKCYMTHATKAIYRWLLSDY
IKVSNIGTEQMLYTEADLEKSMDRIETINFHEEKDVGGIRFCAYNAGHVLGAAMFMIEIA
GVKVLYTGDFSRQEDRHLMAAEIPPSRPEILITESTYGTHIHEKREERERRFTMLVNDIV
NRGGRCLIPVFALGRAQELLLILDEYWGLHPELHDIPIYYASSLAKKCMAVYQTYINAMN
DRIKRQIAVNNPFVFKHITNLKSIDHFEDIGPCVIMASPGVMESGLSRELFEMWCTDSKN
GVIIAGYVVQGTLAKAILSEPEDITTMTGQKLPLKMSVDYISFSAHTDYQQTREFINILK
PPHIVLVHGEQNEMQRLKSALVREYEENSEDIKVYNPRNTVGVDFYFTGEKTAKVMGEIA
VEKPAEDNVLSGVLLKKNFSYHIFASEDIPRYSDMLLSEIQQKQLHRFTSSFTVLQNMLS
HLTGSVPEIIIPNKKLRVLNSVDVSVDKNFATLEWTTTPENDMYADIVVQVLMKIQSMSH
GDMKNVASVPFTEYDHMHFKECLIEILQEMFGEESVPKIFKGEKLFVAVDGKKANINLKN
LEVTCEDEVLQRMVQAAISRLHNTVTPLNITNMK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcggttcaagataagaagagtgaggaaattcagatatctgaagaagaaaatgat
aaacttacaattaaacctctaggtgccggacaagaggttggtagatcatgtattgttatg
gaattcaaaggcaaaaaaattatgcttgattgtggaattcatccaggccttcaaggttta
gatgcattgccatttgtggatctcattgaagcgaacgaaattgatttacttttaatcact
cattttcatttggaccatagtggagcattaccatggtttttactcaagactaaattcaaa
ggaaaatgttatatgactcatgcaactaaagccatatatagatggttactgtcagattac
attaaagtcagtaacataggtactgaacagatgctttacactgaagcagatttagaaaag
agtatggatcgtatagaaacaataaatttccacgaagaaaaagatgttggtggtattcgt
ttttgtgcttataatgcaggccatgtgttgggagctgcaatgtttatgatcgaaattgct
ggtgttaaagttttatatactggagacttttcaagacaagaagacaggcatctaatggct
gctgaaataccaccttcaaggccggaaattcttattactgaatctacttatggaactcat
atacatgaaaaacgtgaagaacgggaacgacggtttactatgcttgtcaatgatattgtc
aatcgaggtggaagatgtttgattccagtttttgcattaggacgagctcaagaattattg
ttaattttagatgaatattggggtcttcacccagaacttcatgatattcctatatattat
gcatcatcgttggctaaaaaatgtatggctgtgtaccagacatatattaatgctatgaat
gatcgtataaaacgtcaaattgctgttaacaatccatttgtttttaaacatattactaac
cttaaaagcattgatcattttgaagatattggtccttgtgttataatggcatcaccaggt
gtcatggaaagtggtctttctagagagctttttgaaatgtggtgtacagatagtaaaaat
ggagttataattgctggttacgtggtacaaggaacattagctaaagctattttatctgaa
cctgaagatatcacaactatgactggtcaaaagttaccattgaaaatgtctgtagattat
atatcattttcagcacatacagattatcagcaaacacgagaatttataaacattttaaaa
ccacctcatattgtattggtacacggagaacaaaatgaaatgcaaaggttgaaatctgct
ttggttagagaatatgaagaaaactctgaagatattaaagtttataaccctcggaataca
gtaggagttgatttttattttactggggaaaaaactgctaaagtaatgggagaaatagct
gttgagaaaccagcggaagataatgttttaagtggcgttttattaaaaaaaaattttagc
tatcatatttttgcttctgaagatataccaagatactcggatatgttattaagtgaaatt
caacaaaaacaacttcacagatttacatcatcatttacggtattacaaaatatgttgtca
catttgactggcagtgtacctgaaataattatccccaacaaaaagttaagagtattaaat
tcagtggatgtctccgtggataaaaactttgctaccctggaatggactactacacctgaa
aatgatatgtatgcagatattgttgtacaagttttgatgaagattcagtcaatgagtcac
ggggatatgaaaaatgtggcatcggttccatttaccgagtatgaccatatgcatttcaag
gaatgtttgattgaaatcttacaagaaatgtttggtgaggaatctgtaccaaaaatattt
aaaggtgaaaaattgtttgtagctgttgatgggaaaaaagctaatattaatttaaagaat
ttggaagtaacatgcgaagatgaggttttgcaacgtatggtacaagctgccatatctaga
ctacataatactgtaacacctttaaatatcacaaatatgaaataa
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