Acyrthosiphon pisum (pea aphid): 100162419
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Entry
100162419 CDS
T01076
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100162419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
api03041
]
100162419
03009 Ribosome biogenesis [BR:
api03009
]
100162419
Enzymes [BR:
api01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100162419
Spliceosome [BR:
api03041
]
Complex A
U1 snRNP components
U1 related factors
100162419
Complex B
100162419
Ribosome biogenesis [BR:
api03009
]
Eukaryotic type
Pre-60S particles
Helicases
100162419
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100162419
NCBI-ProteinID:
XP_001948493
APHIDBASE:
ACYPI003571
UniProt:
A0A8R2A1L3
LinkDB
All DBs
Position
A3:15217571..15229207
Genome browser
AA seq
666 aa
AA seq
DB search
MRRASYGGGSRGAPRGSSSMNRSESYSSRGSSFGSRGGGDSDGYRRGGPGGGGGNSFNSL
KSKQPGGALRKPKWENETLQPFQKNFYTPHSLVLNRPRLEVENYVREKEISYVGSNIPDP
IMNFNEVILPDYVFNEVKKQGFNNPTPIQAVSWPIALSGRNMVGIAQTGSGKTLAYMLPA
ILHINHQPRLLRYDGPIVLVLAPTRELAQQIQQVAVSFGTSTFVRNTCVFGGAPKGPQVD
DLERGVEIVIATPGRLIDFLERNTTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD
RQVLMWSATWPPEVKNLAEEFLDDYIQVNVGSLNLSANHNISQVVDVCDDYEKEQKLYAL
LTDIFSQPDNKTIIFVETKRSVDNIVKLVNRNGWRSIGIHGNKSQNERDHTLNQFRSGQA
NILVATDVAARGLDVDDVKYVINFDYPNSSEDYVHRIGRTGRSSRTGTAFTFVTPSNARQ
AKDLISVLQEAKQVVNPKLFELAEMAAAGVFGKMDRTNRSRDRGGQNNRGRGNHDRGSRG
NYGSGGRGTYRGGSRGGYLGGSHSSSRDSYTSGNQGGRSGFTGTNPVSSIMSNNNNGTAP
GRERASRWGDSNNSQVTQHQPTSQHQPAFVSQPPVQIPNMSNPPPGYASSYGFQAPQPNS
NFRGGF
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgagcgagttatggaggtggtagtcgaggagcaccaagaggtagcagcagtatg
aacagaagcgaaagttatagtagccgtggctcaagttttggtagccgtggcggtggagat
agtgatggatacagacgaggtgggccaggaggaggtggaggaaatagttttaatagctta
aagagtaagcaacctggcggggctctacgtaaacctaaatgggaaaatgaaacacttcaa
cctttccaaaaaaatttttatacgcctcattcattagttttaaaccgtcctaggctagaa
gtggaaaattatgttagggaaaaagaaatttcgtatgtcggtagtaatatcccagatcct
ataatgaatttcaacgaagtcattcttccagactatgtttttaatgaagtaaaaaaacaa
ggatttaacaatccaactcccattcaagcagttagttggccaattgcgttgagtggacga
aacatggttggaatagctcaaacaggttctggaaaaactcttgcttatatgttaccggcg
atattacacatcaatcatcagcctcgtctcttacgttatgatggtccaatagttttagta
ttagcacctactcgtgaacttgctcagcaaattcaacaagtagcagtttcatttggcacc
tctacatttgttagaaacacttgtgtatttggtggtgctcccaaaggtcctcaagttgat
gatttagaacggggtgtagaaattgtaattgcaacacctggaagacttattgacttcttg
gaaaggaatacaaccaatttaaaacgatgcacatatttagtactagatgaagctgatcgt
atgttggatatgggctttgagcctcaaatacgtaaaattattgaacagatcaggccggat
cgtcaagttttgatgtggtcagcaacatggccccctgaagttaaaaatttagctgaagag
tttttggatgattacatacaagtgaatgttggatctttaaatttgtctgccaatcataat
atctcgcaagtagtcgatgtgtgtgatgattatgaaaaagaacaaaaattatatgctttg
ctaacagatatattttctcaaccagataacaaaactatcatttttgtagaaactaaacgt
tctgttgataatattgtgaaattagtaaaccggaatggatggagatccattggaatacat
ggtaataagtctcaaaatgaacgcgatcacacgttgaatcaatttcgttctggccaagca
aatattctggtggcaactgatgtagctgctcgtggtttggatgtggatgatgtcaaatac
gtaataaattttgattacccaaattcatccgaggattatgtacatcgtattggtagaact
ggtcgttctagccgtactggaacagcattcacatttgttacccccagcaatgctcgtcaa
gccaaagatctcatatctgtcttacaagaagctaaacaagtggttaatccaaagcttttt
gaacttgcagaaatggctgctgctggagtgtttggaaagatggaccgtaccaatcgtagc
cgtgatcgtggtggacaaaataatcgaggccgtggtaatcatgaccgtggtagtcgtgga
aactatggtagtggtggccgaggtacatatagaggaggaagtcgaggtggttacttgggt
ggaagtcatagttctagtcgtgatagctatacaagcggaaatcagggaggtcgtagtggg
tttactggaactaatcctgttagcagcattatgagtaataataacaatggaactgctcca
ggtcgcgaaagagcaagcagatggggggatagcaataatagtcaagtaacgcagcaccaa
cctactagtcagcatcaaccagcatttgtgtcgcaaccgcccgttcaaatacctaatatg
agtaatccacctcctggttatgcgagtagttatggattccaagcgcctcaacctaatagt
aattttagaggaggtttttaa
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