Acyrthosiphon pisum (pea aphid): 100162548
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Entry
100162548 CDS
T01076
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100162548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
api03021
]
100162548
03041 Spliceosome [BR:
api03041
]
100162548
03036 Chromosome and associated proteins [BR:
api03036
]
100162548
Transcription machinery [BR:
api03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100162548
Spliceosome [BR:
api03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100162548
Complex B
100162548
Complex C
U2 SnRNP specific factors
100162548
Chromosome and associated proteins [BR:
api03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
100162548
TFTC complex
100162548
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
100162548
NCBI-ProteinID:
XP_003246201
UniProt:
A0A8R2AHG2
LinkDB
All DBs
Position
A1:complement(45203961..45216956)
Genome browser
AA seq
1218 aa
AA seq
DB search
MYLYNMTLQRGSGITHAIHGNFSGGKVQEILVSRGKSLELMRPDPNTGKVHTLLTVEVFG
IIRALMSFRQSGGTKDYIVVGSDSGRIVILEYLPSKNVLDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAIMIGAVEKQKLVYIPNRDAEARLTISSPLEANKSNTLVYHMVGIDVAFDNP
IFACLEIDYEEVDADPTGEAVQTTRQTLTFYEVDFGLNHVVRKYSEPLEEHANSLITVPG
DKDGPGGVLICSENYITYKNQGEQSDIRCPIPRRRNDLDDPERGMILVCSATHKTKSMFF
FLVQTEQGDVFKVTLETNEEFVTEIRLKYFDTVPVASAMCVLKTGFLFVASEFGNHYLYQ
IANLGDDDDEPEFSSAMPLEEGDTFFFAPRQLRNLVLVDEMDSLSPIMACQVADLAAEDT
PQLYMACGRGSRSTLRVLRHGLEVSEMAVSELPGSPNAVWTVKRRADENFDAYIIVSFSN
ATLVLSIGETVEEVSDSGFLGTTPTLSCSPLGDDAVVQIYPNGVRHIRSDKRMHDWKAPE
KKKIVKCAANQRQVVIALGGGELVYFEMDPTGHLNEHKDRKEMNSDVLCMALANAPSGEQ
MSRFLAVGLTDETVRIISLDTTDCLVQLKMQAIPAMPESLCIVEMGASDGGSSDEPAMNS
LSMLYLNIGLQNGVLLRTVLDGVTGEMADTRARYLGGKPVKLFKIRTRGNEAVLAMSSRS
WLSYYYQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISGNTLRILALEKLGAVFNQVSF
PVEYTPRKFVIHPDSAHLIVVETEHNAYTEQTKKQRRIQMAEEMQEAAGEEEQELAKEMA
EAFLNEDLPENIFGAPKAGPGMWASLVRLFNPVQGITEAVYRFPQNEAVMSVALVRFSSY
PDSQFVLFGVANELHLNPRHVTCGYIYTYKVNPTCTSLELVHKTTVDNVPTAICGFQGRV
IIGIGRILRLYDIGKKKLLRKCENKQIPLLIMGIRVMGCRIYVSDVQESVYMVRYKRNEN
QLIIFADDTQPRYITAMEILDYNTVATADKCGNISVVRLASSISDEVDDDPTGNKSLWDR
GLLNGASQKADFIVNFHIGEICTSIQKATLIPGGSESLVYATVTGTIGVLVPFTAHEEQD
FFQHLEMHMRSENPPLCGRDHLSYRSYYFPVKNVCDGDLCEQYNSIDIAKQKSIAADLDK
TPAEVSKRLEDIRTRYAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaatatgacattgcaacggggtagcggcattacgcacgctatccatgga
aatttcagtggaggaaaagtacaggaaattttagtctctcgaggaaagtctttagagcta
atgagacctgatccaaatactggcaaagtccacacattgttaactgtagaagtatttgga
attatccgtgctttgatgagttttaggcagtccggcggtactaaagattacatagttgtt
ggttctgattctggaagaattgttatattggagtatctgccttcaaaaaatgtcttagat
aaagtgcatcaagaaacttttggaaagagtggatgcaggcgaattgttccgggacagtat
ttggccattgatccaaagggaagagctataatgattggtgcggtagaaaaacaaaaatta
gtgtacattcctaacagagatgctgaagcacggcttacaatttcatcacctttggaagct
aataaaagcaatacacttgtgtaccacatggttggaattgatgtagcttttgacaatcca
atttttgcttgccttgaaattgactatgaggaagttgacgcagatccaactggagaagct
gtacaaactacaaggcagactttgacattttatgaagttgattttggtttaaatcatgta
gttcgtaaatatagtgaacctttagaagaacacgctaattctcttattactgttcctggt
gataaagatggaccgggtggtgtactaatatgttcagaaaattatattacctacaaaaat
caaggagaacaatcagacattcgatgtccaattccacgtagacgtaatgatttggacgat
cccgaaagaggaatgattctagtttgtagtgctacacacaagactaaatctatgtttttc
ttcttggttcagactgaacaaggtgatgttttcaaagtgacattagagaccaacgaagag
tttgttacagaaattagactgaagtattttgatactgtccccgtagcttctgccatgtgc
gttctaaaaactgggtttttatttgtagcatcagagtttggtaaccattacctgtaccag
attgctaatttgggtgatgatgacgacgagccagagttcagttcagcaatgcctcttgaa
gaaggagatacatttttttttgctccaagacaactgagaaatttagtattagttgatgaa
atggactcattatcacctatcatggcgtgtcaagttgctgatttagccgctgaagatact
ccacaattatatatggcttgtggtcgaggttcaagatctaccttaagagttttaaggcat
ggacttgaagtttcagaaatggcagtatctgaactacctgggagtccaaatgcagtatgg
accgtgaaaagaagagcggatgaaaattttgatgcctatatcattgtgtctttctcaaat
gccactctagtattgtctattggagaaactgtggaagaagtttcggattcaggtttctta
ggaactacgccaacactatcttgttctccattaggtgatgatgctgttgtacaaatttat
cctaatggtgtgcgtcacatacgttccgataaacgaatgcacgactggaaagcccctgaa
aaaaagaagattgttaagtgtgcggctaatcaacgacaagttgtaattgcccttggtggt
ggtgaacttgtatattttgaaatggatccgactggacatttaaatgaacataaagatcgt
aaagaaatgaattctgatgttctttgtatggcattagcaaatgccccttctggggaacag
atgtcacgctttttagctgttggtttgaccgatgaaactgtccgtatcatttctttagat
actacagactgtttagtacaactaaaaatgcaagcgataccggccatgccagaatcatta
tgtattgtagaaatgggcgctagtgatggcggttcttcagatgaaccagcaatgaattca
ctttcaatgctgtatttgaacattggtttacaaaatggtgttttacttcgtacagtactg
gatggtgttactggagaaatggctgatacgcgagcccgttacttgggaggcaaacctgta
aaactatttaaaatcagaaccaggggaaatgaagcagtacttgccatgtcaagtagatca
tggctcagttattattatcaaaatcgttttcatctaactccactgtcgtatgaaagtttg
gaatatgcatccggtttctcttctgaacagtgtcccgaaggcatagttgctatatctggt
aataccttgcgaattttggcattagaaaaattgggtgctgttttcaaccaagtttcattc
ccggttgagtatacgcccaggaagtttgttatccaccctgattctgctcatttaattgtg
gttgaaactgaacacaatgcctacactgagcaaaccaaaaaacagaggcggatacaaatg
gcagaagaaatgcaggaagctgctggagaggaagaacaagaattagccaaggaaatggct
gaagcttttttgaatgaagatttaccagaaaatatttttggtgctccgaaagctggtcct
ggaatgtgggcatcattagtcagattgtttaatccagttcaaggcataacagaagctgtt
tataggttccctcaaaatgaagcagtaatgagtgttgctctagtacgtttttcaagttat
ccagattcacagtttgttctttttggtgttgcaaatgaacttcacctgaacccaagacat
gttacctgtggatatatatacacttataaagttaaccctacgtgcacttccttggaactg
gtccataagactactgttgataatgtaccaactgcaatatgcggatttcagggacgtgtg
ataattggtattggtagaattttacgactttatgatattggtaaaaagaaactcttacgg
aaatgtgaaaataaacaaataccattattaataatgggaattcgtgttatgggctgtaga
atatatgtgagtgatgttcaagaaagtgtatatatggtacgatataagcgtaatgaaaat
caattaattatttttgctgatgatacacaacctagatatattactgctatggaaatactt
gattacaatacagttgctacagctgacaaatgtggaaatatatcagtggttcgcctagct
tcatcaatatccgatgaggttgatgatgatccaacaggtaataaaagcctgtgggatcgt
ggtttacttaatggagcttcccaaaaagctgatttcattgtgaatttccacattggagaa
atttgtacttcaatacaaaaagctacattgataccgggtggttctgagtctctagtttat
gctactgtgactggtaccattggtgttctcgtgccatttactgctcatgaagaacaagac
tttttccagcatcttgaaatgcacatgcgatctgagaacccaccactttgtggaagagat
catttatcatatcgatcctattatttccctgtaaaaaatgtttgtgatggtgacctttgt
gaacaatataattctattgatattgcaaaacagaaaagcattgcagcagatcttgacaaa
acacctgctgaagtgtctaaaagacttgaagacattaggacaagatatgcattctaa
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