KEGG   Acyrthosiphon pisum (pea aphid): 100162556
Entry
100162556         CDS       T01076                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03013  Nucleocytoplasmic transport
api03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100162556
  09122 Translation
   03013 Nucleocytoplasmic transport
    100162556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100162556
   03041 Spliceosome [BR:api03041]
    100162556
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100162556
Spliceosome [BR:api03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100162556
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_ACSF4 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_DCAF12 ANAPC4_WD40
Other DBs
NCBI-GeneID: 100162556
NCBI-ProteinID: XP_001943765
APHIDBASE: ACYPI003703
UniProt: A0A8R1W0N9
LinkDB
Position
A2:8453839..8456569
AA seq 336 aa
MVDIKYYTTILSQTFSPCGNYLITGNNYGILTVYNLKNELQSGNDFKDQNLSVGGRSYEF
EMIRKMQINSMESGEKFLIIGGVGLIVGVDWDTIIDNNFGENSKVEPLSISWSINIPSPK
DSMLTIDVNCLILNKEDNVLYAGCGDNTVYAFNLECGDVMQKLEGHSDFIHSIDKLDDTI
VSASEDGSVMFWDVRSKDYSSKIIPSSNPEIKRPNLGNWIGSVTITKDWMLCGGGTKLSL
WNRSMAAPMTVYNCVEDSGIHVTKLMDETLYAGGCSKYFYQLSFTDEILCKIETSPVTVF
SCVNQENPFKVTCLAGSSYKIDICTNLNYKMTTLGI
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggttgatatcaaatattatacaacaattttatctcaaacgttttctccttgtgggaac
tatttgattaccggtaataattatggaattttaaccgtctacaatctaaaaaatgaattg
cagtcgggaaacgacttcaaagatcaaaatttgtcagttggcggtcgatcttatgaattt
gagatgatacgtaaaatgcaaataaacagcatggaatctggcgaaaaatttttaataatt
ggtggtgttggactcattgtaggagtggattgggataccattatcgacaataattttggc
gaaaactcaaaagtcgaacccctcagtattagttggagtattaatattccatcgcccaag
gattcaatgttaactatagacgtaaattgtttaatattaaacaaagaggataatgtctta
tatgcaggttgtggcgacaatactgtttatgcctttaatttagaatgtggtgatgttatg
cagaaattagaagggcacagtgattttattcattccattgataaattagatgatacaatt
gtctcagctagtgaagatggatctgtcatgttttgggatgttcgttctaaagattattca
tcaaaaatcattcccagcagtaatccagaaatcaaacgacccaatcttggaaattggatt
ggatctgttacaatcactaaagattggatgttatgtggtggtggaacaaaactgtcatta
tggaatcgttctatggctgccccaatgacagtatacaattgtgttgaagattctggaata
catgttactaaacttatggatgaaacattatatgccggaggatgctcaaaatatttttat
cagttatcatttacggatgaaattttgtgtaaaattgaaaccagtccagtgactgttttc
agttgtgttaaccaagaaaatccgttcaaagtaacatgtcttgcaggttcaagctataaa
atagatatttgcacaaatttaaattacaaaatgactacacttggaatctaa

DBGET integrated database retrieval system