Acyrthosiphon pisum (pea aphid): 100162556
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Entry
100162556 CDS
T01076
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03013
Nucleocytoplasmic transport
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100162556
09122 Translation
03013 Nucleocytoplasmic transport
100162556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100162556
03041 Spliceosome [BR:
api03041
]
100162556
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100162556
Spliceosome [BR:
api03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100162556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR41
NBCH_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_DCAF12
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
100162556
NCBI-ProteinID:
XP_001943765
APHIDBASE:
ACYPI003703
UniProt:
A0A8R1W0N9
LinkDB
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Position
A2:8453839..8456569
Genome browser
AA seq
336 aa
AA seq
DB search
MVDIKYYTTILSQTFSPCGNYLITGNNYGILTVYNLKNELQSGNDFKDQNLSVGGRSYEF
EMIRKMQINSMESGEKFLIIGGVGLIVGVDWDTIIDNNFGENSKVEPLSISWSINIPSPK
DSMLTIDVNCLILNKEDNVLYAGCGDNTVYAFNLECGDVMQKLEGHSDFIHSIDKLDDTI
VSASEDGSVMFWDVRSKDYSSKIIPSSNPEIKRPNLGNWIGSVTITKDWMLCGGGTKLSL
WNRSMAAPMTVYNCVEDSGIHVTKLMDETLYAGGCSKYFYQLSFTDEILCKIETSPVTVF
SCVNQENPFKVTCLAGSSYKIDICTNLNYKMTTLGI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggttgatatcaaatattatacaacaattttatctcaaacgttttctccttgtgggaac
tatttgattaccggtaataattatggaattttaaccgtctacaatctaaaaaatgaattg
cagtcgggaaacgacttcaaagatcaaaatttgtcagttggcggtcgatcttatgaattt
gagatgatacgtaaaatgcaaataaacagcatggaatctggcgaaaaatttttaataatt
ggtggtgttggactcattgtaggagtggattgggataccattatcgacaataattttggc
gaaaactcaaaagtcgaacccctcagtattagttggagtattaatattccatcgcccaag
gattcaatgttaactatagacgtaaattgtttaatattaaacaaagaggataatgtctta
tatgcaggttgtggcgacaatactgtttatgcctttaatttagaatgtggtgatgttatg
cagaaattagaagggcacagtgattttattcattccattgataaattagatgatacaatt
gtctcagctagtgaagatggatctgtcatgttttgggatgttcgttctaaagattattca
tcaaaaatcattcccagcagtaatccagaaatcaaacgacccaatcttggaaattggatt
ggatctgttacaatcactaaagattggatgttatgtggtggtggaacaaaactgtcatta
tggaatcgttctatggctgccccaatgacagtatacaattgtgttgaagattctggaata
catgttactaaacttatggatgaaacattatatgccggaggatgctcaaaatatttttat
cagttatcatttacggatgaaattttgtgtaaaattgaaaccagtccagtgactgttttc
agttgtgttaaccaagaaaatccgttcaaagtaacatgtcttgcaggttcaagctataaa
atagatatttgcacaaatttaaattacaaaatgactacacttggaatctaa
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integrated database retrieval system