Acyrthosiphon pisum (pea aphid): 100162576
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Entry
100162576 CDS
T01076
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100162576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100162576
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100162576
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
ANAPC4_WD40
ASA1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_Vps41
CFAP251_N
Beta-prop_WDR75_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_RIG_1st
Beta-prop_DCAF12
Tricorn_2nd
PEP5_VPS11_N
PROPPIN
PAC11
Beta-prop_WDR11_2nd
WD_LRWD1
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
100162576
NCBI-ProteinID:
XP_001952829
APHIDBASE:
ACYPI003722
UniProt:
A0A8R2ACG3
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Position
A2:complement(67780578..67783903)
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AA seq
760 aa
AA seq
DB search
MSITVDTSFLVPPPPINFSIPPPSTNTFIPTNYRFQGPIPLHIRGPSLGGPPRHQLNKSA
PPLDVDFDGKRLRKSGLRKTVDYNASLIRMLQNRIWQRDFRDRPFLQPDILYTPQLLPPQ
CYVDNSVNSVTTAFVKTVTNKVRCPVFCLAWTPEGRRLITGASSGEFTLWNGLTFNFETI
LQAHDSPVRSMVWSHNGNWMTTGDHTGFIKYWQSNMNNVKMFQAHNEAVRGISFSQSDDK
FATCSDDGTIRIWDFFTNREEKILRGHGADVKCIDWHPHKGLLISGSKDNQQPIKLWDPK
TGQSLATLHAHKSTVMDVKWNANGNWVVSASRDHLLKLFDIRNLSHEVQTFRGHKKEAST
IAWHPYHENLFCSGGSDGAILFWNVGVDKFVGSVDQAHDSIVWSLAWHPLGEVLCSGSND
YTCKFWTRNRPGDKMTGKYHSVNTVSNMLKTDNMCADAQSTIPGMGLEDIDEEDSNKTLV
DNNTIPLLDIASTEETTRVRQIKKIPYSKPIPKNFQKFWNEYKTNDEIIEDDTEENLGPD
SDVVNNVVESLMDLIPGSRPASELKPESLLVYGQMIKVDQNSPLANAIREGRESLMRLLH
SGAIPEVRQHLSFESNKDPIYSYAAKHLQKDQDLRRNQFVNNVNVNFPMNQDIDLRVNNN
FNPNYGSSTNFQTASNDNFNRPVINQPSNATGYNQQPRSYYNKSHPYNNNTQNNRPSRQY
GNNQNGMRNGPPPNLMDSTFSRPSTYRSNSQRPPQNYNNM
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtccattaccgtggatacttctttcttggtacctccacctccaataaatttttcgatt
ccgccgccttcaacaaatacattcattccgacaaactacaggtttcaaggtcctatacct
ttacacatccgtggcccgagtttgggtggaccaccaaggcatcaactaaataaaagtgcg
ccaccacttgatgtagatttcgatggcaaacgtttgaggaaatcaggtctccgtaaaact
gtggattataatgcatcactaattcggatgcttcaaaatcgtatttggcaacgagatttc
agagatcgaccatttttacagccagatatattatatacacctcaacttttacctccacag
tgttatgtggataattctgtaaattcagttactactgcttttgtcaaaactgttactaat
aaagtacgatgtcctgtattttgtttagcatggacacctgaaggtagacgtttaataact
ggtgcgtccagcggagaatttactctatggaatgggctaacgttcaattttgaaactatt
ttgcaagcacatgactcacctgttcgttcaatggtatggtctcataatggtaattggatg
accactggtgaccatactggtttcattaaatattggcaatcaaatatgaataacgtcaag
atgtttcaggcgcataatgaagctgttagaggtattagttttagccaatcagatgataaa
ttcgcaacttgttcagatgatggaaccatacgtatttgggatttttttactaacagagaa
gaaaagatacttagaggacacggcgcggatgtaaaatgcattgattggcatccgcataaa
ggtcttttaatttctggtagtaaagataatcaacagccaattaaactgtgggacccaaaa
actggtcagtcattagccactttacacgctcataaaagtacagttatggacgttaaatgg
aatgccaatggtaattgggttgtgtctgcatccagagatcacttgttaaaattatttgat
attagaaatctttcccatgaagttcaaacattcagaggtcacaaaaaagaagctagtact
atagcttggcatccatatcatgaaaacttattttgcagtggtggttctgatggtgctata
ttattttggaatgtgggtgttgataaatttgttggatctgttgatcaagctcatgatagt
attgtttggtcattagcttggcatccattaggtgaggttttgtgttctggttcaaatgat
tacacttgtaagttttggacccgaaatagacctggagataaaatgactggaaaatatcac
tcagtaaatacagtttctaacatgttaaaaacagataatatgtgtgctgatgctcaatct
actattcctggaatgggtttagaagacattgatgaagaagattctaataaaacattagtt
gacaataataccataccacttttagatattgcttctactgaagaaacaactagagttcga
caaattaagaaaattccttactccaaacctattcctaaaaatttccaaaagttttggaat
gaatataagactaatgatgaaattattgaagatgataccgaagaaaatcttggccctgat
agtgatgtagtcaataatgttgttgaaagtttaatggatttgataccaggatctagacca
gcaagtgaattaaagccagaatctctccttgtttatggacaaatgattaaagtagatcaa
aattcaccattagcaaatgcaattagggaaggtcgagaatcattaatgcgtcttcttcat
tctggtgcgattccagaagtacgacaacatctatcttttgaaagcaacaaagatccaatt
tattcatacgctgccaaacaccttcaaaaagatcaagacttacgcagaaatcaattcgtt
aataatgtaaatgtcaactttcctatgaatcaagatattgatcttagagtcaataataat
tttaatccaaattatggttcttctactaattttcaaacagcttctaacgataattttaat
agaccagttataaatcaaccatcaaacgcaaccggatacaatcaacaaccgagatcttat
tacaataagtcacatccttacaataacaatacacaaaataataggccatctcgacaatat
ggaaacaatcaaaatggcatgcgaaatggtccgccacctaatttaatggactccactttt
tcaaggccatccacttacagatcaaattcacaaagaccacctcaaaattataacaatatg
tga
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