Acyrthosiphon pisum (pea aphid): 100162773 Help Entry 100162773         CDS       T01076                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism api  Acyrthosiphon pisum (pea aphid) Pathway api03018   RNA degradation Brite KEGG Orthology (KO) [BR:api00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     100162773  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:api03019]     100162773 Enzymes [BR:api01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      100162773 Messenger RNA biogenesis [BR:api03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      100162773   mRNA degradation factors    3'-5' decay     Ski complex      100162773 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT DEAD ResIII DEXQc_Suv3 Helicase_C MTR4_beta-barrel nSTAND3 Helicase_dom4_arc Intein_splicing AAA_22 Motif Other DBs NCBI-GeneID:  100162773 NCBI-ProteinID:  XP_001948018 APHIDBASE:  ACYPI003903 UniProt:  A0A8R2A1C1 LinkDB All DBs Position A1:complement(118167363..118175355) Genome browser AA seq 1181 aa AA seqDB search MDNYKMKYEVPGGITSIMPSIPADLLSYINCIESMPVYKGESTLPKRDVNLLSLYADNNV KYMPTNLIPERDPKTGKIVCYEEVINDPVFQSDGNLIPCLKSMNNQCTVNQHEDNMFQFQ FDPNDLPVAPGMSNKLKINQNDQNTSMNICTIDTTAEYEWTEDVGGFWDDEVPEIISQPD TTPEPISIDEINHIKKDENFVLKITGNAERALVKSKWVEELDISKPIDNFDELLPDPAYK WEFELDTFQKQAVLKLEEKSSVFVAAHTSAGKTVIAEYAIALAKKHQLRCIYTSPIKALS NQKFRDFKKKFGDVGLITGDFQVKPEAQCLIVTTEILCSMLYSDSDKIKETEFVILDEVH YVNDRDRGHIWEQILIMLPKRVKLVMLSATVTNVIDFANWIGRTRDSKIYVVFTLYRPVP LEHYLYIGSNTSMEMKDNMHLIRKADSGFLIQGYRKAADLLKKNKEVKKYQESKNFKDQK PKWVNFLRFLDKNNLFPVVVFILSRKKCDMMAESLKNSVNFLLNNKESQANEYFFNDAIK KLKPEDRALPQVVLMKELLCQGIAVHHSGILPILKEIVEMQFQKSLVKCLFATETFAIGI NMPARTVVFEAINKFDGIEKRNLAPAEYTQMAGRAGRRGHDDSGTVIIMANDQLPNDREL TNMMLGKSAKLESQFKVSYSIILNMFKKKNSETLEEILGSSFIEAARAKKKDEYTEELNS LKIIHGNDNWEPTGKQDIIVKEFYLCAKEYLDCRNEEWDKLYAASGKSFSEIGRFVIITH RHYIGNLAIILSSNPKKIPKEFRVLVLGNDKVNNEESDNKMDSWYKFIYLSKKRRLLDKS LDVISNNAHTILTISSNSIFAITKFSGNFDIDSIIKNWEMRQNERFRDAAISTHCLRAIT MLSEKTLLLNRAENDDSVLSLLDLGIDNFELHRTMLHMHALENRVYSIELSDIIAFEDVF SKLYEYQTRIERIAELQHQVSNKALQLYNEYISKVEILKELKYINPRNEITTQKGNVAAT MGSHELLVTELLLCNMFEEMKPEEIAAVLSCLVCESKSNIDLEQIKEQNLINGMNLIKQK HDYIQMVESNYLSNYERVNLNFNLVKVLYLWAQEKPFSEIMEITDIQEGIIVRCIVQLNE ILTVIKNAAKMIGTNKISEKMQEVLDKIKRNIVFTPSLYME NT seq 3546 nt NT seq  +upstreamnt  +downstreamnt atggacaattacaaaatgaaatatgaggtacctggtggtattacctcgataatgccaagc atcccagcagatttattaagttatataaattgtatagaaagtatgccagtttataaaggt gaatcaactctgccaaaaagagacgttaacttactatccttgtatgctgataataatgta aagtatatgcctactaatttaatacctgaaagggatcccaagactggtaaaattgtttgc tatgaagaagttattaatgatccagtttttcaatctgatggtaatttaataccttgtcta aaatcaatgaacaatcaatgtactgtcaaccaacatgaagataacatgtttcaatttcaa tttgatcctaatgatttaccagtagctccaggaatgtcaaacaaattgaaaataaaccaa aatgatcaaaatacatctatgaacatttgtactattgatacaacagcagaatatgaatgg actgaagatgtaggaggattttgggatgatgaagtaccagaaataatcagccaaccagat actacaccagaaccaatttcaatagatgaaattaatcacatcaagaaagatgaaaacttt gttcttaaaattactggaaatgcagaaagagctctagttaaatcaaagtgggttgaagaa ttagatatctcaaaaccaattgataactttgacgaattattacctgatcctgcttataaa tgggaatttgaattagatacatttcaaaaacaagcagtacttaaattggaagaaaaaagt agtgtatttgtagcagctcatacatcagcaggtaaaactgttattgcagaatatgctata gcacttgctaaaaaacatcaattgagatgcatatatacatctccaataaaagcattatcc aatcaaaaatttcgagatttcaaaaaaaaatttggagatgttggtcttattacaggagat tttcaagtgaaaccagaagctcaatgtcttattgttacaacagaaatattatgttcaatg ctatatagtgattcagataaaattaaagaaacggagtttgtgattcttgatgaagttcat tatgtaaatgatagagatagaggtcacatttgggaacaaattttaattatgctacccaaa cgtgtgaaattagttatgctgagtgctaccgtcactaatgttattgattttgccaattgg atcggccgtactcgtgattctaagatatatgttgtatttactctttatcgaccagttcct cttgaacattatctttatattggttcaaatacatctatggaaatgaaagacaatatgcat ctaattagaaaagcagacagtgggtttctcattcaaggctatcgtaaagctgcagattta ttaaaaaaaaataaagaagtaaaaaaatatcaagaatccaagaatttcaaagatcaaaaa ccaaaatgggtcaactttttgagatttcttgacaaaaataacttgtttccagtagttgtt ttcattttgtccagaaaaaaatgtgatatgatggcagaatctttaaaaaactctgttaat tttttattaaataataaagaatcacaagcaaatgagtatttttttaatgatgctataaaa aaattaaaacctgaagacagagctttacctcaagttgttttaatgaaagaattattatgt caaggaattgcagttcaccatagtggaattttaccaatactaaaagaaatagtagaaatg caatttcaaaaaagtttagttaagtgtctatttgccactgaaacatttgcgataggtatt aatatgccagccagaacagtggtatttgaagcaattaacaaatttgatggtatagaaaaa agaaatttggcaccggctgagtacactcaaatggcaggacgtgcaggtcgtcgaggtcat gatgatagtggtacagtaataataatggcaaatgatcaattacctaacgacagagaattg acaaatatgatgctaggtaaatcagctaaattagaatctcagtttaaagtcagttattct attatattgaatatgttcaaaaaaaaaaattctgaaactctagaagaaattttaggtagt agtttcattgaagctgctagagctaaaaaaaaagatgaatatactgaagaattaaattct ttaaaaataatacatggaaatgataattgggaaccaacaggaaagcaagatataattgta aaagaattctatctttgtgccaaagaatatttagactgcagaaatgaagaatgggataaa ctttatgctgcaagtggtaaaagtttcagcgaaattggtagatttgtcattattacacac cggcattatattggaaatttagcaattatattatcaagcaacccaaaaaaaattccaaaa gaatttcgagtattagtgttgggcaatgataaggtaaataatgaagaatcagacaataaa atggattcttggtataaatttatttacttatctaaaaaaaggagattactagataaatca ttagatgtaatttctaataatgctcataccattttaactatatcttcaaattcaatattt gctattactaaattttctggtaattttgatattgactcaattataaaaaattgggaaatg agacaaaatgaacgttttagagatgcagctatttctacacactgcctgagagctattaca atgctatcagaaaaaacattacttttaaatcgagcagaaaatgacgattctgtgctaagc ttgttagatctaggaattgataattttgaattacaccgaactatgttacatatgcatgct ttggaaaatcgagtgtacagtattgaattgtctgacattattgcatttgaagatgtcttc tcaaaattatatgaatatcaaacaagaatagaaagaatagcagaattacaacaccaagta tcaaacaaagcattacagttatataatgaatatatcagtaaagttgaaattctcaaagaa ttaaaatatataaatccaaggaatgaaataactacccaaaaaggaaatgtagctgcaact atgggatcacatgaacttttagtcactgaactactattatgtaatatgtttgaagaaatg aaaccagaagaaattgctgctgttctttcgtgtttagtttgtgaatctaagtcaaatatt gatttggaacaaattaaagaacaaaatttgataaatggaatgaatttaataaaacaaaaa catgattacattcagatggtcgaatcaaattatttaagcaactatgaacgtgttaatctc aactttaatttagtaaaagtgctgtatttatgggctcaagaaaagcctttttctgaaata atggaaataacagatattcaagaagggattatagtcagatgcatagttcaattgaatgaa attttgactgttattaaaaatgcagcaaaaatgattggtactaacaaaataagtgaaaaa atgcaagaagtactagacaaaatcaaaagaaatattgtattcactccatctttatacatg gaatga

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