| Entry |
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| Name |
(RefSeq) uncharacterized protein LOC100162883 isoform X3
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| KO |
| K14400 | pre-mRNA cleavage complex 2 protein Pcf11 |
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| Organism |
api Acyrthosiphon pisum (pea aphid)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:api00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100162883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:api03021]
100162883
03019 Messenger RNA biogenesis [BR:api03019]
100162883
Transcription machinery [BR:api03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100162883
Messenger RNA biogenesis [BR:api03019]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100162883
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
A2:85934686..85957071
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| AA seq |
1813 aa
MTAKEKEVAEEYFNALADLNVNSKPLINMLTMLAEENSAYAPIIVQCIERQLHKVQADSK
LPVLYLIDSVMKNIGPPYTPLFIHNIEKLFASTFIKVDEKTRGNMYKLRSTWNDVVTPTK
LHALDVMIHSIDKNWPISAAPPNIHVNPKFLNNVNHTEAPKPVQPIHNESEEDISLREKF
IKKQKELLELQQKKLELELLQTKNQMEIQKKRSMNKINLSKNAFNASTSSSVSVSPSNEE
VYAKIQSSENSRRITENSVKMIDVSSISSESPSMPIKVIVSPSKKFQPTPLPAVQSLKNP
AQPFVSQQQNSEMVVSSQFFNVNQQIAKINPVSTQLLQTLNRDPRLRKVENAVKSSPSLA
NDVKQPILKNKDDKKLDKPKRDSSKHRESKRKERSPSCSPSKKELPRKTHKKTDRKEKNL
KDEKYHKRRDEKKNIKELDLKKKNILSNVKTDQDETVTIKGAILPKIEEKLSKDEPKNDV
NLLSPEAIEINASKDKDLFNETDINSSENINSELEKTDSLEDSDSLKRLRIYMQTMKKSP
DPSTPAPLEMKNDSDTHAVKSNQNIIIKQQNDIDLRIKVPTVKRTSDSIKTDDIEPAAKK
SKSEIIDELFGAEDVDLRTLSALPIVPTPPPPPQISETQNSEVGKSWAKYKEIKPDTFKI
PYKSPTKKMPCELNETLVENNDTMDVDMRAKPTQNNKSHILRQAEEALNAGSISFDEYKK
IMCQVIEMNEVEKLEEVNNAEDTNAKLKEHVIPKIAIPVTGNGTDLKPTLVEPVTIIEKP
VDENSPGLGSWNLVIKKPIDVSGSDSDCSSKSCSTGSEESKKINKKSDSEDRPVYKRRKT
TFKRNEKENSKTRTWRNHKSWNSRPENGSRFSQNRVEPWSRGPRPNYSHSTRSLVPPPMY
EVPRPTAPFASSSPDWTVPVIPPSDPVILDMIAHDATKTISIDGVSREIRFYGPTAITFV
SWDDPREIYFQGTPKNVIFDDLFPVLCHFNSPDREFLLDGQPHRVRLGAPTRELYLDGKF
YECFFGGSPIFTDLGGVKRSVKLEGPPPSVNIGNTKRQDLVAGRIAIIIDNSYTVPVYLD
AKPQRIDVGNTALIFRFIDGLMRAMINDQPFKVNYNGPPQAIIVRGNKHYLRFTGLPPNI
RPGYAAISQMMGVVLTEDSSTESLPPIPVPPMPPNFTGFEMTALTPNEDINQLPPQSFSS
SYSLAPSKSTTSLPLLSNVAQKLESVTSSYVPPAMSAPIIPPVLPSDMDINELFKKLVDS
GIVPKDKPKEVVQSKLKKKEKEAENLTIKPVDFSDPLSLKQKQPGLIHNLYTGIQCSSCG
IRFTAEFTIKYSSHLDWHFRQNRREKMASKTVQSRKWYYDTSDWCKYEEQEDETTRAASW
FDIQAEKGAKEDEKLEEENVPCVPAGENSELAACYLCHDQFEQFYNEKDEEWQLKNCVEK
DKRLYHPMCHDDMIKTREEKIRKRNRAIVEAKQLESQRIEIKEGEQSELKLAEDIKIKDE
KKEEIHLKDEEKLIAEKDSLIKKEIILEKEPVGIKEVFTEKEAVLDKETVTKTETIMETE
TVMETEIETIKETETETIKETETIMETETIMETETETIIETESIKLEENEEQITDENSLQ
TEPVFQESQTEENMKTNNYEDLEIPDTMEIIQVTEVLSPKLVDEPIVENINSLSSPQNTQ
EIVPEEIKPKSPSPVSTMTCSIDGNTDTEWNVPVAPAMGTIKINISQKMTPVVKPIILSE
NTSIEPQSPPDFTQTFGEIDPDQPPPPGLEMETVVAPKIQREMKPRLMLNAKKLKEYPIV
NKGKEMSGLCSIM |
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| NT seq |
5442 nt +upstreamnt +downstreamnt
atgactgccaaggaaaaagaagtagcagaagaatattttaatgccttagccgacctcaac
gtcaatagcaagcctttgataaacatgttgacaatgctggctgaagagaactcagcttat
gcgccaatcattgtacagtgtattgaaagacaactgcataaggtgcaggctgacagcaag
ttaccagtactttacttaattgactcggtcatgaaaaacattggaccgccatatacacca
cttttcattcacaacattgagaaactttttgctagcactttcattaaagttgatgaaaag
actagaggaaatatgtataaactacgttctacatggaatgatgttgtaacacctactaaa
cttcacgcccttgatgtaatgattcattcaattgacaaaaactggcctataagcgctgct
ccaccaaacattcatgttaatccaaaatttctaaataatgttaatcataccgaggcaccg
aaacctgtacaaccaatacacaatgagtctgaagaagatatatctttacgagaaaaattc
attaagaaacaaaaggaattgcttgaactacagcaaaaaaaattagaattggaattattg
caaaccaaaaatcaaatggaaattcaaaaaaaaagatcaatgaacaagataaatctatca
aaaaatgcttttaatgcgagtacatcatcttctgtgagtgtttcgccttctaatgaagaa
gtatatgcaaaaattcagtcatctgaaaattctcgaagaataactgagaattcagttaaa
atgattgatgtatcttcaatcagttcagagtcaccttcaatgccaattaaagttattgtt
tcaccttctaaaaaattccaaccaacacctttacctgcagtacaatcgttaaaaaatcct
gcacaaccatttgtatcacagcaacaaaattcagaaatggttgtttctagtcaatttttc
aatgtaaaccaacaaattgccaaaatcaacccagtcagtacacaattgttacaaactcta
aaccgcgatccacgtttaagaaaagtggaaaatgctgtaaagtcgtcaccatcacttgct
aatgatgttaaacagccaattctcaaaaataaagatgataaaaaacttgataaacccaaa
agagacagtagtaaacatcgggaatcaaaaagaaaagaaagaagtccaagttgttcacct
tctaaaaaagaactcccaagaaagacccataaaaaaactgaccgcaaagaaaaaaactta
aaagatgaaaaatatcacaaaagaagagatgaaaaaaaaaatattaaagaactggactta
aagaagaaaaatatattatccaatgtaaaaaccgatcaggatgaaacagtgactatcaaa
ggtgcaatactgccaaaaatcgaagaaaagttgtccaaagacgaacctaaaaatgatgtt
aatcttcttagtcctgaagctattgaaataaatgcttctaaagacaaagatttatttaat
gaaactgatataaacagttctgaaaacattaattctgaattagaaaaaacagattctctg
gaagattccgattctttaaaacgtcttcgtatatacatgcaaacaatgaagaaatcacct
gatccatcaactccagcaccattagaaatgaaaaatgactcagacacccatgctgtaaaa
tccaatcaaaacattattatcaaacaacaaaatgacattgacctaagaattaaagtcccg
actgtgaagaggacctccgattcaatcaaaactgatgatatagaacctgcagcaaaaaag
agcaaatctgaaatcattgatgaactctttggtgcagaagatgtggatttacgaacatta
tctgctctacctattgtacctacaccaccacctccgccacaaatatctgaaacacaaaat
tctgaggttggtaaatcttgggcaaaatataaggaaataaaaccagatacgtttaaaata
ccatacaagtctcctaccaaaaaaatgccttgtgaattgaatgaaacattagtagaaaat
aatgatacaatggacgtagacatgcgagctaaacctacacaaaacaataaaagccatatt
cttagacaagctgaagaagctttaaacgcaggaagcatatcttttgatgaatataaaaaa
attatgtgtcaggtaattgaaatgaatgaagtggaaaaattagaagaagtcaataatgca
gaagatactaatgctaaattaaaggagcacgttattccaaaaattgctatacctgttact
ggaaatggtactgatttaaaacctaccttagtagaaccggtaactattattgaaaaacct
gttgatgaaaacagtcccgggcttggctcttggaatcttgttatcaaaaaaccaattgat
gtcagcggaagtgatagcgattgttcttcaaaaagttgttctactggttcagaagagtca
aaaaaaattaacaaaaaatcagattccgaggatcgacctgtatataaaaggcgtaaaaca
acattcaaacgcaatgaaaaagaaaattctaaaactcgtacttggagaaatcataaaagt
tggaattcaagaccggaaaatggttctagattctctcaaaatagagtagaaccttggtct
agaggacctcgtccaaattattctcactcaacaagatctcttgttccaccgcctatgtat
gaagtgcctagaccaactgctccatttgcatcttcttcacctgattggacagttcctgtt
attcctccttcagatcctgtaatactggatatgattgctcatgatgctacaaaaactatc
agtattgatggtgtatcgagagaaatacgattttatggtccaacagcgattacttttgta
tcttgggacgatcctagagagatatattttcaaggaactccaaaaaacgttatatttgat
gatctatttcctgttttgtgccatttcaatagtcctgatagagaatttttattagatggt
caacctcatagagtacggttaggtgcaccaactcgagaactttatttagacggaaaattc
tatgaatgtttttttggtggttctccaatctttactgaccttggtggtgttaaaagatct
gttaaacttgaaggtcctcctccttcagtcaatataggcaacacaaagcgacaagattta
gttgctggtcgtatagcaattattattgataactcgtatactgtacctgtctatttggat
gctaaaccacagcgtattgatgtgggtaacactgcacttatttttcgttttattgatgga
ttaatgagagctatgattaatgaccaaccgttcaaagttaactataacggaccaccacaa
gcaattattgtaagaggcaataaacactacttaagattcacaggattaccaccaaatatt
agaccaggatacgctgctatttctcaaatgatgggtgtagtactaactgaagattcttct
accgaatctttaccgccaatacctgttccaccaatgccaccaaatttcaccggttttgaa
atgactgcattaacaccaaatgaagatattaaccaacttcctccacaatcattctcttct
tcatattctttagcaccaagtaaatcaacgacatcactacctctactttctaatgttgct
cagaaattagaatctgttacaagttcttatgtaccacctgcaatgtctgcacctataata
cctcctgtcttacctagtgatatggacattaatgagctatttaagaagttagtggacagt
ggaattgtacctaaggacaagccaaaagaagttgtccaatcaaaactaaaaaagaaagag
aaggaggcagaaaatttaactataaaacctgttgatttttcagatcctttatccttaaaa
caaaaacaaccaggattaattcacaacttatatacaggaattcagtgcagttcttgtggt
attcgtttcactgcagagtttaccattaagtatagtagtcatttagattggcattttaga
caaaatagacgtgaaaaaatggcaagcaaaactgttcaatctagaaaatggtattatgat
actagtgactggtgtaaatatgaagaacaagaagatgaaacgactagagctgcgagttgg
tttgatatacaagcagaaaaaggtgctaaagaagatgaaaaattagaagaagagaatgtt
ccttgtgttccagctggtgaaaatagcgaactagctgcctgttatttgtgtcatgatcag
tttgaacaattttataatgaaaaagatgaagagtggcaattgaagaattgtgttgaaaag
gataaaaggctttatcatcccatgtgccatgatgatatgattaaaactcgagaggaaaaa
attcgtaagagaaatcgagctattgtagaagctaaacaattggaaagccaaagaatagaa
atcaaagaaggagaacaatctgaattaaaattggcagaagatataaaaatcaaagatgaa
aaaaaagaagaaatacatttgaaagatgaagaaaaacttatagctgaaaaagattcatta
ataaaaaaagaaataattttagaaaaagaaccagttgggattaaagaagtatttacagaa
aaagaagcagttctagataaagaaactgttacaaaaactgaaacaattatggaaacagaa
acagttatggaaacagaaatagaaacaattaaggaaacagaaacagaaacaattaaggaa
acagaaacaattatggaaacagaaacaattatggaaacagaaacagaaacaattatagaa
accgaatcaattaaacttgaagaaaatgaagagcaaataacagatgaaaattcacttcaa
actgaaccagtttttcaagaatcacagactgaagaaaatatgaagacaaataattatgaa
gatttggaaattcctgacactatggaaataattcaagtgactgaagttttatcacctaaa
ttagttgatgaacccattgttgaaaacattaacagtttgtcatccccccaaaacactcaa
gaaattgtacctgaagaaattaaacctaaatctccatcccctgtttctacaatgacatgt
tctattgatggaaacactgatactgaatggaatgttccagttgctcccgcaatggggaca
atcaagataaacatcagtcaaaaaatgacacctgttgtaaaaccaatcattctctctgaa
aacacatccattgaaccacagtcaccaccagatttcacacagacgtttggggaaatcgat
cctgatcaaccaccaccaccaggtcttgaaatggaaactgtagtggctcctaaaatacaa
agggaaatgaaaccaagactgatgctcaatgcaaaaaaacttaaggaatatccaatagtt
aataaaggtaaagaaatgtcaggattatgttcaattatgtaa |
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