Acyrthosiphon pisum (pea aphid): 100162918
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Entry
100162918 CDS
T01076
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X4
KO
K13218
polypyrimidine tract-binding protein 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100162918
03041 Spliceosome [BR:
api03041
]
100162918
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100162918
Spliceosome [BR:
api03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100162918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
100162918
NCBI-ProteinID:
XP_008183512
APHIDBASE:
ACYPI004037
UniProt:
A0A8R2B645
LinkDB
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Position
A2:48693474..48832476
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AA seq
653 aa
AA seq
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MDMLTCQYIKLPAEESSLPNFFKFTPYVPGSLKRGSDEMVTSPGVEGGPVSNGDTNGTNH
VDNNNDAKKVKLDKTANNKPSRVIHIRNIPNEVTEAEVIHLGIPFGKVTNVLVLKGKNQA
FLEMADETSASAMVTYFTTCTAQLRGRAVFIQFSNHKELKTDQTHSNANASAQAALQAAQ
ALAGQSDVQGGPNTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQY
PDVVTAQSAKLSLDGQNLFHTGHLFDLSHLNNSLDGQNIYTSCCKLRIEYSKLSSLNVKY
NNDKSRDYTNPTLPNGDNTVMETLAALGVDSVAGNQLLPHQLSLLLSGVPSAAAGLPQAR
RQLTTGADHSRLAGTRHFIHSDAKDLRHCVNIGSPGMLTPSFNAVHGLASPLATSYANSP
VTSMPLGFTLPGGSLAAGTLRLPGQMTGQTCVLLVSNLNEEMVTPDAIFTLFGVYGDVLR
VKILYNKKDGALVQMAEPHQAHLAMLHLDKVRLYGKYIRVMQSKYQTVQLPKEGQPDSGL
TKDYTSSPLHRFKKPGSKNYQNIYPPSSTLHLSNIPTTLSEDFLKTAFENNTFTVKDFKF
FPKDRKMALIQMESLEEAVAALIKMHNYRLSEQNHLRVSFSKSNIQPDTLTPN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggatatgttgacttgccaatatataaaactccctgccgaagaatcgtctttgccaaat
tttttcaaattcacaccgtatgtccctggatccctaaagcgtgggtccgacgagatggta
acatcacctggggttgaaggaggaccggtgagcaacggagacacgaatggaaccaatcac
gtggacaacaataatgacgcgaagaaggtcaaacttgacaaaaccgccaacaacaagcca
tcccgggtaatacacatacgcaacatacccaacgaggtcaccgaagcagaggtcatacat
ctgggaattccgtttggaaaagttaccaacgtactcgtactcaaaggcaaaaatcaggcc
ttcctagaaatggcggacgagacgtcggcatcggctatggtcacatacttcacgacatgc
acagctcagctcaggggtcgcgcagttttcatacagttcagcaatcataaggagttgaaa
acggaccaaactcacagcaatgccaacgcatcggctcaagcggcactacaagcggcccaa
gcactggctggccagagtgacgtacaaggaggtccaaataccgtgctccgggtaatcgtc
gagcacatggtgttcccaatcagtctggacgtcctctacgagatattttcgcgttacggc
aaagtgctgaaaattgtcacgtttaccaaaaacaattcgttccaagtgctgatccagtat
cccgacgtggtcacggcacaatccgctaaattgtcattggacggacaaaatctgttccat
accggccatttgtttgatctgtcgcatttgaacaactctctggacggccaaaacatttac
acgtcgtgctgcaaactacgcatcgagtactcgaaactgtccagtctgaacgtgaaatac
aacaacgacaagtcgcgggactacaccaacccgacgctgcccaacggcgacaacacggta
atggaaacgctggcggcgctcggcgtggactctgtggctggcaaccagctgctgccacac
cagctcagtctactgctgtccggcgtgccaagtgccgctgctggacttccgcaggcccgc
cggcagttgaccaccggcgccgaccatagccgactcgcaggtactcgacatttcatccac
tccgacgcgaaggatttacgtcactgcgttaatataggcagcccaggtatgctgacgccg
tcgttcaatgccgtccacggacttgcttcgccactagccacgtcatacgccaactcaccc
gtcactagcatgccactcggattcaccctacccggtggttcgttggcggctggcacgctc
agactccctggccagatgactggacagacgtgtgtgctgttggtcagcaacctaaacgaa
gagatggtcacgccagacgctattttcactttgtttggtgtttacggagacgtattgcgt
gtgaagatcttgtacaacaaaaaagacggtgctttggtacaaatggctgagccgcatcaa
gcccatctggccatgcttcatttggacaaagttcgtttgtacggcaagtacatacgagtg
atgcaatccaagtaccagactgttcagctgccaaaagaaggacagcccgactcggggctg
acaaaagattacacctcgtcgccgttacaccgattcaagaagcctggctccaaaaactac
cagaacatctatccaccgtcgtccactctccacttgtccaacataccgacgacattatca
gaagatttcttaaagacggcgttcgaaaacaacacctttaccgtcaaagacttcaagttc
ttccctaaagaccgcaaaatggcacttattcaaatggaatccttggaggaagccgtcgcc
gcacttatcaagatgcacaattatcggctcagtgaacaaaaccacctgcgagtatcattc
tcaaagtccaacatccaaccggacacgctgacaccaaactag
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