Acyrthosiphon pisum (pea aphid): 100163110
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Entry
100163110 CDS
T01076
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100163110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
api03041
]
100163110
Spliceosome [BR:
api03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100163110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
PRP4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
eIF2A
Beta-prop_SCAP
Ge1_WD40
Beta-prop_IFT140_1st
WD40_like
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
100163110
NCBI-ProteinID:
XP_001949663
APHIDBASE:
ACYPI004218
UniProt:
A0A8R1W224
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Position
A3:complement(15299199..15302011)
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AA seq
507 aa
AA seq
DB search
MSDDEEITYVKKQKTIHYGSLEDQERIRLSSLAFTENDGEPKVVGGNINVSNEYFDLEDA
ISKDKQALLEEFERKKKARHVQVSTDDDEVKKNLRKLGQAICLFGEGPAERRNRLRELLS
RVGEDVVAKKPEEEREKRQQIKDQDTTWYHEGPPSLLDARLYMAEYSLLRSHIRLEKLRE
EASIPESTLTARLQDLHKYTTSLSIYCSQIGDTRPISYCRFSPDSKFIATSSWSGLCKLW
SVPDCSLVQTFRGHNCNVCSITFNPHAGTAENVCDLVSCASDGSVKLWSMDSKKEEPVAD
LEGHAPFRVSRADFHPSGRFLGTCCFDNSWRLWDLEQGEEVLHQEGHCKPVYCMSFQCDG
SIVATGGLDAFGRVWDLRTGRCIMFMEGHLKSIYSIDFSPNGYQMATGSEDNTCRIWDVR
KRSCLYTIPAHMSLVSGLRYQPEGHFIVTSSYDNTIKIWANKTWQMLKTLSGHDNKIMGV
DISPDSKYIASSSYDRTFKLWAPEYSS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaagaaattacttatgtaaaaaaacaaaaaaccatacactacggatcg
ttagaagatcaagaacgtatccgtctatcttctttagcctttactgaaaacgatggtgaa
ccaaaagttgttggaggaaatataaatgtatccaatgaatattttgatttggaggatgct
atatctaaagacaaacaagctttacttgaagaatttgaacgtaaaaagaaagcccggcac
gtgcaagtttctactgatgatgacgaagttaaaaaaaacctcagaaagcttggacaagcc
atatgcttgtttggggaaggaccagcagaaagaagaaatagattgagagaactactttca
agagtaggagaagatgttgtagcaaaaaaaccagaagaagaaagagagaaacgacagcaa
atcaaagatcaagatacaacctggtaccatgaagggccaccttcactcctagatgcacgt
ttatatatggcagagtattcattgttgagatcacacattcgtttagaaaagctcagagaa
gaagctagtatacctgaatcaacacttacagctcgcttacaagatttacacaaatacaca
acatctctttctatttattgtagtcaaattggcgatactagaccaatttcatactgccgg
tttagtcctgattcaaagtttattgctacatcatcttggagtggtttgtgtaaattatgg
tcagttcctgattgttcattagttcaaacattcagaggacataattgtaatgtctgctct
atcacatttaatccgcatgccggcactgcagaaaatgtctgtgatctcgtatcatgcgcc
agtgatggttctgttaaactgtggtcgatggatagcaaaaaagaagaacctgtagcagac
ttggaaggtcatgcaccatttagagtgtcaagagcggattttcatccatctggtcgattt
ttaggaacttgctgttttgataactcttggcgattatgggatttagaacaaggggaagaa
gttctccatcaagaaggacattgtaaaccagtttattgtatgtcgtttcagtgtgatggc
tcaattgttgcgactgggggattggatgcttttggtcgtgtttgggatttgcgtacagga
agatgtattatgtttatggaaggtcatttaaagtctatatatagtatagacttttctcct
aatggttatcaaatggccactggtagtgaggataacacatgtcgtatttgggatgtaaga
aaaagatcatgtttatacactattccagcgcacatgagtcttgtttcaggactgagatac
caacctgaaggtcattttatagttacgtcttcatatgataatacaatcaagatttgggcg
aataaaacatggcaaatgttaaaaacactatctggacatgacaacaaaataatgggtgtg
gacatatctccagattctaaatatatagcatcttcatcatatgatagaacatttaaatta
tgggctcctgaatactcatcataa
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