Acyrthosiphon pisum (pea aphid): 100163177
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Entry
100163177 CDS
T01076
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03013
Nucleocytoplasmic transport
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100163177
09122 Translation
03013 Nucleocytoplasmic transport
100163177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100163177
03041 Spliceosome [BR:
api03041
]
100163177
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100163177
Spliceosome [BR:
api03041
]
Complex C
Other components
EJC/TREX
100163177
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100163177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
OrsD
Motif
Other DBs
NCBI-GeneID:
100163177
NCBI-ProteinID:
XP_003246335
APHIDBASE:
ACYPI004278
UniProt:
A0A8R1W6F0
LinkDB
All DBs
Position
A1
Genome browser
AA seq
1483 aa
AA seq
DB search
MDKYEGWGTTEKTEFLSKCHEFVKNSKSEFSLTITTNGNPTDLAKAILSLLIACIKGKIK
TNLGLSILSDLCSNEEIASVVMDVFNYLDTDTALSDNGGPEREYFGNFVKESQKLLTDKL
LKERLEIDSLKDIKLLNNIFSTKFIKIKTKLFYKQRKYNLFREESEGYSKLVTELNSDNM
DPKIMVEIIKSLIGCFNLDPNRVLDIILDSFEHHTDNKAEHFFIPLLHDYMPESQRLTEV
LAFKLRQVNNLTRSSYRLIALLIQYNLIGLDNIYPWLTPDDKDIKTNWEKDIKNGQDYLR
KASSMIITKAPESETSDDNIQPKPEENQKFCLCEAMLEIGDWNTAQVLIKRFPEYYAVEY
PPIGDALCSLINQVIKPVYNQVFNLHSKSVKYSTDDQPNSRSLKHVLTLEEFHDVVLPML
ITLGPGLHRDPVLMFKIVRIVREALTNEGIKNKDYTPSETGFYFDTLSLLDRVLLPTLSL
AEGSSISEHLWTLLQLYPYHCRYALYNSWKNDTHKYHPKLLTKKVDVQKKARSVMKRLCK
DNTKPSSRVIGKISHYAPGYLFDYILGQIQVFDNLASIVVECLKYMTSLSFDVLGYCIVE
TLGKSGQDRVKHDGTSISVWLQSTASFCGAIFKKHPVELTGILQYVANQLKTENSLDLLI
LKEIVLRMAGVEVMEQITPDQIEAMSGGDYLKTEAGYYNQIRNTKKSSIRLKESLLDNNL
AVALCLLIAQQRHSVIYKEHESIHIKLAGQLYDQCQDTLVQYGTFLGSTFSMEEYINHLP
SVHDLLDQHHVHMDVAFFLARPMFNHSINTRFDALRKADPNAKKSLAVRQNKYAEAHKEV
MSSIVKSVVPLHPEKVWEDVSPGFLVTFWSLTLYDLCVPNEAYKREINKLKAQSSAMGDS
KQASTKVKKEQERLAITIAKLNDEKKKQQEHVEKIFFMLNQEKDSWFLSRSAKAAKNETI
TQFLQLCLFPRCIFTHMDAMYCAKFVQTLHSLKTANFSTLLCYDRLFCDITYSVTLCTEN
EAHRYGIFLNEMLKNVTRWHSTKDIFEKECATYPGFVTKCKNSDQFVQSSNDHVGYENFR
HVCHKWHYKITKAMMVCLESKDYVQIRNSLIILIKIVNHFPVLAKLATLIEKKVEKVRED
EKDKRQDLYTLATSYCGLLKGRASQFLKDSDFHLVHEKVSQIKNIVDNKSDVTKNNQSIK
KKDEDTVPEAKTPPLPVIKVINGTSSTEWVEAEKKIIDNKAKTEKRPIKITNAEKVNEKV
IVQENIAETLKEEKSDESNEKKREKRQREDNIDRVKDSYTDVAKTQILTAGPGNQPANNH
NKVQIPRINLSQISINIVDVASNGSHTADEKDIKRKKLDTSPITKQLMKHNPDVKSETNG
STLIEKKDKKIKKSQSADSTSLKETRKDRKLSRKRHERREETTPELKRRKEDEKHVKSSA
DIRHDDMVGDKHRSSREKSPHPKEWSERTESRHKRHRTGDKRK
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggataagtatgaaggttggggaacaaccgaaaaaactgaatttttgtcaaaatgtcat
gaatttgttaaaaattctaaatctgaattttcattaacaattacaactaatggcaatcct
actgatttggctaaagctattctttcattgttgatagcatgtattaaaggaaaaataaaa
acaaaccttggtttatctattttaagtgatctatgttcaaatgaagaaatagcttctgtt
gtaatggatgtcttcaattacttagatactgacacagccctttcagataacggaggacca
gaaagagaatattttggaaattttgtcaaagaatcgcaaaagttattgactgacaaatta
cttaaagaacgattagaaattgactcgttaaaggatataaagttattaaataatattttt
tctacaaaatttattaaaattaaaactaaacttttctataaacagcgaaaatataattta
tttcgcgaagaatctgaaggctattctaaattagttactgaattaaattccgataatatg
gatcctaaaatcatggttgaaattattaaatcattgattggttgcttcaacttggaccca
aatcgtgtgttagatataattttagattcgtttgaacaccatacagataataaagccgaa
catttttttattccattactacatgattatatgcctgaatcacagaggctaactgaagta
ttggcatttaaattacgacaagtgaataatttaactcgttcatcttacagattgatcgct
ttattaattcaatacaatttgattggactggataacatttatccttggttaactccagat
gataaagatattaaaacaaattgggaaaaagatataaaaaatggacaagattatttgagg
aaagcatcaagtatgatcataacaaaagcaccggaatctgaaacttctgatgataatatt
caacctaaacctgaagaaaatcaaaaattttgtttgtgtgaagctatgttagaaattggg
gattggaatactgctcaagtattaattaaaagatttccagaatactatgctgtagagtat
cctcctatcggtgatgcactttgctctcttattaatcaagtcattaaacctgtttataat
caggtttttaatcttcactcaaaatctgtaaaatattcaactgatgatcagccaaattca
cgttctcttaaacatgttttaacactagaagaatttcatgatgtagtcttacctatgtta
ataacattaggtcctggactacaccgtgatcctgttcttatgtttaaaattgtcagaatt
gttagagaggcattaactaatgaaggaattaaaaataaagattatactccatctgaaacg
ggtttttattttgacacattatcattattagatcgtgtcttattacctactctttcatta
gcagaaggaagtagtatttcagaacatctgtggactttattgcaactttatccttatcac
tgcaggtatgctctttataacagttggaaaaatgatacacataaatatcatccaaaatta
ttaacaaagaaagttgatgtacagaaaaaagccagatctgtaatgaaacgtctttgcaaa
gataataccaaaccatctagtcgtgttattggaaaaatatcacattatgcacctggttat
ttatttgattatatactgggacaaattcaagtatttgataatttggctagcattgtggtt
gaatgcttaaagtacatgacaagtttgtcgtttgatgttcttggatattgtattgtggaa
acattaggcaaaagtggccaagatcgagttaaacatgacggtacttccatttcagtgtgg
cttcaaagtacagcatcattttgtggtgccatatttaaaaaacaccctgtagaacttaca
ggaattcttcaatatgtagccaatcaattaaaaacagaaaatagtttggatcttcttata
cttaaagaaattgtgttgagaatggctggtgttgaggttatggaacaaataactcctgat
caaattgaagctatgtcaggtggtgattatctaaaaactgaggctggttactacaatcag
attagaaatacaaaaaaatcatctattagactgaaagaatcattattagataataatttg
gctgttgctttatgcctgttaattgctcaacaaaggcatagtgttatttataaagaacat
gaatctattcatatcaaactcgctgggcagctctatgatcaatgccaagacacattggtt
caatatggtacatttttggggtctacattttcaatggaagaatatatcaaccatttgcca
tctgtacatgatttacttgatcaacatcatgttcatatggatgttgcattttttctagct
aggcctatgtttaatcattccattaatactcgttttgatgctttgcgtaaagctgaccct
aatgcaaaaaaatccttagctgtgcggcaaaataagtatgcagaagctcataaagaagtg
atgtcatctattgtcaaatctgttgttccactccaccctgaaaaggtgtgggaagatgtg
tcacctgggtttttagtcacattttggtcattgaccttatatgacttatgtgttccaaac
gaagcttataaacgagaaataaataaacttaaagctcagtcttcagctatgggagattct
aagcaagcgagtactaaagtaaaaaaagaacaagaacgattagctattaccattgctaaa
ttgaacgatgaaaagaaaaaacaacaagaacacgttgaaaaaatattctttatgttgaat
caggaaaaggattcctggtttttatctcgttcagctaaagcagcaaaaaacgagactatt
actcagtttttacagctgtgtttatttccccgttgcattttcacacatatggatgctatg
tattgtgctaaatttgttcaaacattacattcattgaaaacagctaatttttcaactctt
ttatgctatgatagattgttttgtgatataacatattcagtaacactctgtacagaaaat
gaagcacatcgttatggtatatttcttaacgaaatgttgaaaaatgtaactcgttggcat
tcaaccaaggatatatttgaaaaagaatgtgctacatatcctggctttgtgactaaatgt
aagaatagtgatcaatttgttcaatctagtaatgatcatgtaggatatgaaaacttcaga
catgtttgtcataaatggcattacaagattactaaagctatgatggtttgtttagagtca
aaagattacgtacaaattcgtaactcgttgattattctcattaaaattgtcaatcatttt
ccggttttggcaaaattagctacattaattgaaaaaaaggtagaaaaggtaagagaagat
gaaaaggataaacgacaagatctctatactttagcaacatcttattgtggactactcaaa
ggtagagctagtcaatttcttaaggacagtgatttccatctggtccacgaaaaggtaagt
caaataaaaaacattgttgataataagtctgatgtaacaaaaaataatcaatctattaag
aaaaaagatgaagatacagttcctgaagccaaaaccccaccactgcctgttattaaagtt
attaatggaacatcatcaacagaatgggttgaagctgaaaaaaagattattgataacaaa
gcaaaaacagaaaaacgacctatcaaaatcacaaatgctgaaaaagtcaatgaaaaagtc
atagtacaagagaatatcgcagaaactttgaaggaagaaaaatctgatgaatcaaatgaa
aagaaaagagaaaaacgacaaagagaagataatattgacagagtaaaagattcttacact
gatgtagccaaaacacaaatacttactgctggtccaggcaatcaacctgccaataatcat
aataaagttcagatcccgaggattaatttatcacaaatatcgattaatattgtagatgtg
gcgagtaatggttctcacactgctgacgaaaaagatataaaacgaaaaaaattggacacc
agtccaattacgaagcagctcatgaagcataatcctgacgtcaaatctgagacaaatggt
tcaactttgatagagaaaaaagataagaagattaaaaaatcacaatctgctgattcaaca
tcactaaaggaaactcggaaagatcgtaaactaagccgcaaacgacatgaacgacgtgaa
gaaactacacctgaattaaagagacgtaaagaagatgagaaacatgtaaaatcatcagct
gatattcgtcatgatgacatggtgggtgataaacaccggtctagtagagaaaaatctcct
catccgaaagaatggtccgaacgaactgaatcacgccataaaaggcataggacgggcgat
aaaaggaagtga
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