Acyrthosiphon pisum (pea aphid): 100163299
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Entry
100163299 CDS
T01076
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100163299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100163299
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100163299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
100163299
NCBI-ProteinID:
XP_001948038
APHIDBASE:
ACYPI004393
UniProt:
A0A8R1W3B6
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Position
A1:complement(26249514..26254690)
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AA seq
553 aa
AA seq
DB search
MVSIKTEVTMADNGDDDQWLYGDSNSNLDPVGALVEDIKPAEPVGILEDEEARLMEFLAN
PGPGSIDIPPTVKELDDEDPNRPRSPETFLGGPGIQAEILVKRSEHSLETNLVETATEED
INVPEKVAEENNEDRQISSEDSEEDSDDDIVVAAGNFTLSSMENNMVSLSQQNNASPSTA
GINLKRNNLLTLTNIPGMSSGNKHQGKFNVEDFESMGTINGVPAHEYSIETTEEKPWLKP
GADITDYFNYGFNENTWLAYCERQRKMRCNESLVGMSTLAMHNQQVSISATNNNMIPTLD
VKSSSKFQTPNVPPKENTIEVMTAERREYSRKHFSTPDLSVPPPIIPTNFDVPPPMIQNS
INSIPPPGFGPPQINVPYEPEYYPHEPDPYYNTFEPTQDMQWNQSWNSNVKSIENIPTLS
NGDSYNKARPDLVRDKEYYASRVKKEPEERVYERDRESRNRYRERDRERDRERDRDRDRE
RSRHRESEGVESPEASYKEEREYKHKSHRHRSRSRSHEKRSRKHKSRSRSGSRHRHKKKK
KKSEKNKEDDNSE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtataaagactgaggtgaccatggctgacaacggtgatgatgaccagtggttg
tatggggactcaaattcaaatcttgaccctgtcggtgcattagtcgaagatattaaacca
gctgaaccagttggtattttagaagatgaggaagcacgtcttatggagttcttggcaaat
cctggcccaggaagtatagatatcccacctactgtaaaagaattagatgatgaggatcct
aatcgacctcgaagtccagaaacatttttaggagggcctggaattcaagcagagatactg
gttaaacgttcagaacattcacttgaaactaacctggtagagactgcaactgaagaggac
attaatgttcctgaaaaagtagctgaagagaataatgaagatagacaaatatcatctgaa
gatagtgaagaagatagtgatgacgacattgttgtggctgctggaaattttacattgtct
tcaatggaaaataacatggtatcactttcacagcaaaataatgcaagcccatcaactgct
ggaataaatttaaaacgaaataacttattaacattaacaaatattcctggaatgtcatct
ggaaataaacatcaaggaaaatttaatgtcgaagattttgaaagtatgggcaccataaat
ggtgttcctgctcatgaatattctattgaaactactgaagaaaaaccatggttgaagcca
ggtgcagatatcacagattattttaattatggatttaatgaaaacacatggttggcatat
tgtgaacgccaaaggaaaatgcgttgtaatgaatcattagttggaatgtcaacactggct
atgcataatcaacaagtttctataagtgctaccaataataatatgattcctactttggat
gttaaatcaagttcaaaatttcaaacaccaaatgttccacctaaggaaaacactattgag
gttatgacagccgaaagaagagaatacagtcgtaaacatttttcaactcctgatttatca
gtacctcctccaataattccaacaaattttgatgtacctccaccaatgattcaaaattct
ataaattctataccaccccctgggtttggtcctccacaaataaatgtgccttatgaacca
gaatactatcctcatgaacctgatccatactataatacatttgaacctactcaagatatg
caatggaatcaaagctggaactcgaacgtaaaaagtatagagaacattccaactctgtca
aatggagattcatacaacaaagcaagaccagatttggtaagagataaagaatattatgca
tcaagagttaaaaaagaaccagaagaaagggtatatgaacgagatcgtgagagtcgcaat
cgataccgtgaaagagatcgagagagggatcgtgaacgtgatagggacagggacagggaa
cgtagcagacatagagaaagtgagggtgttgaaagtccagaagcaagttataaagaagag
agagaatataaacacaagtctcaccgtcatcgctctcgaagtcgtagtcacgaaaagcgt
tctaggaaacacaagtctcgtagtagaagtgggtctagacatcgtcacaaaaagaagaaa
aagaagtctgagaagaacaaggaagatgataacagtgaataa
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