Acyrthosiphon pisum (pea aphid): 100163545
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Entry
100163545 CDS
T01076
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
api03021
]
100163545
03036 Chromosome and associated proteins [BR:
api03036
]
100163545
Transcription machinery [BR:
api03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100163545
Chromosome and associated proteins [BR:
api03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100163545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
HHH_9
S1
HHH_3
Spt6_S1
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
100163545
NCBI-ProteinID:
XP_001950257
APHIDBASE:
ACYPI004626
UniProt:
A0A8R2A857
LinkDB
All DBs
Position
A2
Genome browser
AA seq
1814 aa
AA seq
DB search
MSQFIDSEAEESEDDELDEIDKKKVKKIKAMESDDDDDEDDEDKIREELKDLIDDNPIDE
SDGSGDESDGTDGIKRKKSDDDFDDRLEEDDYDLIEENLGVKVERRKRFKRLRRLEDEES
DDEGTGENATEDREAIANTLFDVSDNEEERTTDRVSSRAERVDNYDVEGDEDGEGYSDED
DDGFIVDDEGRPIKEKKKKRKHVYHDAALQEAQDIFGVDFDYDEFEKYDDEYEDDVSDDD
YLEDEEDGERRQRPKPQKRRKATRKSIFEIYEPIELKRGHFTDLDNQIRNNDIPERMQLR
EVPVTPVPEGSDELDDEADWIYKQAFCKPTITTQENKGGIDPRLQSKKGPQTIGKIKKAL
DFMRNQNFEVPFLAYYRKEYVEPELDINALWRVYHFDAKWCQLKSRKTMLIELLEKMRNY
QMEMLMMDTNAPMPDHMRIIKDEDIDKLRAVQTNEELKDIQGHFMLYYANDVPAMQENAR
KKSRELKRKARELREERRKLAIEAGEDVLDDDEDAGNLDDDDSNVETVKPASSSGPYTMC
LKSGLAGFAKRFGLKPEHFAANVRDNYQRHEVDQESVDPYKLAGEYCNELLKTPDEVLKA
GKYMVACQLSREPLIRKCLRETFFDRAKINIVPTKRGVKEIDENHNCYSMKYIRRKPVRD
LVRDDFLKLQMAEDDKLLTISFDEEVDGLGSLPYIEEVKQLYIRDEFSSNVQQWNDVRRE
CVDLAYRKLLMPEMVKELRRSLLAEAKEHILKSCKHKLSNWLAVGPYKPEVDEDDDDWDT
SKGIRVMGLAYSPDHEQASFACILSTDGEVVDHLRLPYIMKRPFNDDIKAKRDGDFNHIR
NFLIFKKPHVIVIGAESRDALWLVRDIKAVVDQLVVDEQFPQIQVEILDNHLARIFANSI
KGENEFRDYPQLLRESISLGRRMQDPLVEFSQLCSTDDEILCLRYHQYQEVLNQEELLEG
LYQEFINRTNEVGVDINDVVQRVYAPNLLQFVCGLGPRKATALIKLMKQTNQRLENRTQL
VTACHMGPKIFINCAGFIRIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYD
DEEANPAGALEEILDAPERLKDLDLDAFAEELERQGFGNKSITLYDIRQELNHRYKDIRV
AYKPPNPAQVFELLTKETQETFFVGKMVLSTVTGIARRKPQNDQLDKANPVRNDETGLWQ
CPFCFKNDFLELSDVWNHFDAGGCPGQASGIRIRLDNGISGFIAMKNLSNTHVANPEDRV
RFNQAIHCRIIKIEPDRFSFEATSKSSDLKDQENHWRPQKDPYYDHETESKQRKTELDKN
KIKNAQTYIKRVIVHPCFHNVSFAEAVKLLNNSDQGDAIIRPSSKGADHLTVTWKVADNV
YQHIDITEKGKVNAFSLGRSLWIGTEEFEDLDEIIARHITPMASNARELLRFRYYRDTDG
GNIEKAEQILREERTNNPSKIHYIVSVSQKYAGKFLLSCLPTRRSKHEYITVTPEGYRFR
SQNFDSIGSLFRWYKEHFRDATPHVTPVASRSAGQTYGPSPHTEPSPMNRSHSSHSATPQ
YSQSPHASYNNMQPSAYNTPYTPSGQTPYIGNYATPRYGASQAPVHDGVFLHPSSLTPIV
QSSPKPSPSKPPVQSADPNDWRRMAEEWAKAKQRGDGGYSTPMSDGGGRHASRSRYNNHR
YNMNRERETSTPRSDAPSPTPSASSYGYNSPAPTKTYKSSYTTSSHNSSKSPRGPSSNSG
TPYDPFTMEPGQDSPGVYASSSRSVRNDENDPDRYASPGSRWTPRSGRSTPHTINSPRSM
IESSMGDNTPLYED
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtttatagattctgaagcagaggagagtgaagatgacgagttggatgaaatt
gataaaaaaaaagtaaagaaaattaaagcaatggaaagtgatgatgacgatgatgaagat
gatgaagacaaaattcgtgaagaattaaaggatttaattgacgataatccaattgatgaa
agtgatggttctggtgatgaatcagatggtacagatggtataaagagaaaaaaatctgat
gacgactttgatgatcgattggaagaagacgattatgatcttattgaagaaaatcttggg
gttaaagtggaacgaagaaaacgattcaaaagattaagacgtttagaagatgaagaaagt
gatgatgaaggtactggtgaaaatgctactgaagatcgagaggctattgctaacacttta
tttgatgtgtctgataatgaagaagaaaggacaactgatcgtgtttcttcaagagctgaa
cgggttgacaattatgatgtagaaggtgatgaggatggagaaggatattctgatgaagac
gatgatggatttattgtagatgatgagggacggccaattaaggaaaaaaagaaaaaacgc
aaacatgtatatcatgatgctgcccttcaagaggcacaagacattttcggtgttgatttt
gactatgacgaatttgaaaaatatgatgatgagtatgaagatgatgtgtccgatgatgac
tatttagaagatgaggaagatggtgagagaagacaaaggccaaaacctcaaaaacgtaga
aaagctactagaaaatcaatatttgaaatatatgaacccatcgagttgaaaaggggtcat
tttacagacttagacaaccagattcgtaataatgatataccagaaagaatgcaactacgt
gaagttccggttacaccagtaccagaaggttctgacgaattagatgacgaagcggactgg
atttacaaacaagcattttgcaaaccaactattactacacaagaaaataaaggaggtatt
gatcctcgacttcaatctaaaaaaggacctcaaactatcggaaaaattaaaaaggcgtta
gacttcatgcgaaatcaaaactttgaagttccatttttagcatattacagaaaagaatat
gttgaacctgaacttgatatcaatgctttgtggagagtttaccattttgatgctaagtgg
tgtcaattgaaatctcgcaaaacaatgctaattgaattattggaaaaaatgcgaaattat
cagatggaaatgttaatgatggatacaaatgcccctatgccagatcatatgcgcattatc
aaagatgaagatattgataaattacgtgcagttcaaacaaatgaagaactaaaagatatt
caaggtcattttatgttgtactatgccaatgatgtccctgctatgcaagaaaatgctaga
aaaaaatctagagaattgaaaagaaaagctagagaactaagagaagaaagaagaaaactt
gcaatagaagctggtgaagatgtacttgatgatgatgaagatgctggtaatttagatgat
gatgattcaaacgttgaaaccgttaaacctgcaagtagttcaggaccttataccatgtgt
ctaaaatctggacttgctgggtttgcaaaacgttttggtttaaaacctgaacattttgct
gctaatgttcgtgacaactaccaaaggcatgaagtagatcaagaatctgtagatccatat
aagcttgcaggtgaatactgcaatgaattattaaaaacccctgatgaagttttaaaggct
ggcaaatatatggtagcatgtcaattatctcgagaaccactcataaggaaatgtttgcgt
gagactttctttgatcgtgctaaaatcaatattgtaccaaccaaacggggtgtcaaagaa
attgatgaaaatcataattgttattcaatgaaatacattcgacgtaaacccgtgagagat
ttagtaagagatgactttttaaagttacaaatggcagaagatgataaattgcttactatt
tcatttgatgaagaagtagatggtttgggttctcttccctatatagaagaagtcaaacag
ctttatataagagatgaatttagttcaaatgtacaacaatggaatgacgtgaggcgtgaa
tgtgttgacttagcttatagaaaattattaatgcctgaaatggtaaaagaactcaggcga
agtctactggctgaagctaaagagcatatattaaaatcttgcaaacataaactgtcaaat
tggctagctgtaggtccatataaaccagaagtagatgaagatgatgacgattgggataca
agcaaaggcattagagttatgggattagcttattcgcccgatcatgaacaagcatcgttt
gcatgtattttatctactgatggtgaagttgttgatcatctacgtctgccatatattatg
aaaagaccatttaatgatgatataaaggcaaaaagagatggagatttcaatcatataagg
aacttcttaatttttaaaaaaccccatgtcatagttattggagcagagtctagggatgca
ttgtggctagttagagatatcaaagcagttgttgaccaactagttgttgatgaacaattt
cctcaaatacaagttgaaattttagataatcacctggctaggatttttgccaattctatt
aaaggagaaaatgaattcagagattatccacaacttttacgtgaatccatatctttagga
cgtagaatgcaagatcctttagttgaattttctcaattgtgttcaacagacgatgagata
ttgtgtcttcgctatcatcagtatcaagaagtgctcaatcaagaagaattactcgaaggt
ttatatcaagaatttataaatcgtactaatgaagtgggtgttgacataaacgatgtggtt
caacgtgtttatgcgcccaacctattacaatttgtctgtggtttgggacctcgtaaagcc
actgcattaattaaattaatgaaacagacaaatcaacgattagaaaaccgaactcaatta
gttactgcatgtcatatgggccctaagatatttataaactgtgctggatttataagaatt
gataccaactctttgggtgatagtactgaagcatatgtagaagttttagatggatctaga
gtacatccagaaacatatgaatgggccagaaaaatggcagttgatgctctagagtatgat
gatgaggaggcaaatccagcaggagctctagaagaaattttagatgcaccagaaagactg
aaagacttggatttagatgcatttgctgaagaattagaaagacagggttttggtaataaa
agtatcacactttatgatatacgccaagagttaaaccaccgctataaagatattcgagtg
gcatataagcctcctaatcctgctcaagtttttgaactattaactaaggaaactcaggaa
accttttttgttggaaaaatggttttatctactgtcactggaattgcacgtagaaaacca
caaaatgatcaacttgacaaggcaaatccagtgagaaatgatgaaactggtttatggcaa
tgtccattttgttttaagaacgacttccttgaattatcagatgtatggaaccattttgat
gctggtggttgccctggtcaagcatcaggaattcgtataagattagataatggtataagt
ggctttatagcaatgaaaaatttatcaaatactcatgttgccaaccctgaagatcgtgtt
cgttttaaccaggcaatacattgtcggattatcaaaattgaaccagatagattctcattt
gaagctacttctaaaagctcagatttaaaagaccaagaaaaccattggcgaccccaaaaa
gatccttattatgatcatgaaactgaaagcaaacaacgaaaaactgaattagacaagaat
aaaataaaaaatgctcagacatatattaaacgagtaattgtgcatccatgtttccacaat
gtatcatttgcagaagctgttaaattgttgaataattctgaccaaggagatgctattatt
agaccatctagtaaaggtgctgaccatttaactgttacttggaaagtagctgataatgtt
taccaacacattgacataacagaaaaagggaaagtcaatgctttttcattgggacgttca
ctttggattggtactgaagaatttgaagacctagatgaaattattgcacgtcatattact
ccaatggcaagcaatgctagagaattgttacggtttaggtattatcgagatacagatgga
ggcaatattgaaaaggccgagcaaatactccgagaagaaagaactaataacccttcaaaa
atccattacattgtatctgtgtcacagaaatatgcaggtaaatttcttctatcctgttta
cctactcgtaggtcgaaacatgagtacataactgttacaccagaaggctatcgtttccgt
agccaaaattttgattctattggatctttattccgatggtataaagaacatttccgagat
gctacccctcatgtaacaccagtagcgtctcgatctgccggacaaacttatggaccttct
ccgcatacagaaccttctccaatgaatcgtagtcatagtagccactcggctacacctcaa
tattcgcaatccccgcatgcatcatacaacaacatgcagccatctgcttataacactccg
tacacaccatcagggcagactccttacattggcaattatgctactcctcgttatggtgct
tctcaggcaccagttcatgatggtgtatttcttcatccaagctcccttacaccaattgtt
caaagcagtccaaaaccatctccctctaaaccacctgtacaatcagcagatccaaatgat
tggcgtcgaatggctgaagaatgggctaaagctaaacaacgaggtgatggaggatattct
acacccatgtctgatggaggcgggcgacacgcatctcgtagcaggtacaacaatcatcga
tataatatgaaccgagaaagagaaacaagtacaccacgcagcgatgcaccttcacctacc
ccaagtgcctcatcatacggatataattcaccagcaccaacaaagacctacaaaagtagt
tatacaacatcttcacataattcatcaaagtcaccgcgaggcccatcatctaattccggt
acaccatatgatccatttacaatggaacctgggcaagattcacctggagtatatgcttca
tcgtcccgttcagtacgcaatgatgaaaacgatccagacagatatgcatcacctggatca
agatggactccgcggtctggtcggtcaactccccataccattaatagccctagatcaatg
attgaatcttctatgggtgataatacaccactgtatgaagactaa
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