Acyrthosiphon pisum (pea aphid): 100163579
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Entry
100163579 CDS
T01076
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api04382
Cornified envelope formation
api04512
ECM-receptor interaction
api04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
api00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100163579
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100163579
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100163579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
api04147
]
100163579
00536 Glycosaminoglycan binding proteins [BR:
api00536
]
100163579
Exosome [BR:
api04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100163579
Glycosaminoglycan binding proteins [BR:
api00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100163579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100163579
NCBI-ProteinID:
XP_001951336
APHIDBASE:
ACYPI004656
UniProt:
A0A8R1W692
LinkDB
All DBs
Position
X:complement(31522487..31576870)
Genome browser
AA seq
1760 aa
AA seq
DB search
MARGGICRRLGVVVLVIVPCLLLMVQETQQAACRGCSNPFKCDCKGIVGEPGDKGIFGQQ
GSEGAPGETGPDGPPGTKGEKGSIGDWGDLGLKGYRGENGLTGHHGIDGDKGYPGAAGPP
GLKGLEGCNGTDGNDGLMGEDGYPGERGLTGLDGLQGLRGDPGDGGANSKGLKGERGESS
LPGVKGEPGYPGIEGVQGDIGVPGVQGPTGDPGYDGLKGDEGDSQPGYKGSIGDDGDRGE
PGEPSTIEIDNPSVQPPDLIVYKGLPGNRGPRGDNGRPGYKGEIGTKGLKGRPGYDGFKG
VKGAQGNVGQRGKDGNVGIFGESGIKGDKGAPGYSGLAGEDGDKGGNGEPGRLGIPGVQG
SEGEPGIYDPNLDEIRNGSEGPQGPIGPEGPRGEDGLPGRIGQQGIMGPPGEPGPPGIPG
ARGPKGLSMKGEQGIEGLAGPRGEQGPLGVPGPIGPIGEKGIHGITVFGPPGEDGRLGRD
GSEGPKGDQGDQGFKGPKGFPATRPGERIVGPRGAPGIPGFSGIPGVPGFPGLPGRNGSK
GLRGDDCGYCNPGIDGPKGDVGVDGQNGAPGPPGSAGLNGIRGTKGKMGAPGLPGYKGSS
GRPGSRGLAGYPGMPGERGTVIFVGVKQTLISGEKGPKGFPGREGDMGSIGLPGLSGLPG
RMGRKGMKGHYGDSGLPGTDGRPGEHGRPGLKGDPADELNPEYLKGDEGYPGITGTKGEQ
GNAGAPGEPGDSSQYTATNIGERGIKGIPGEKGQHGLKGQKGVEGDQGFVGFSGAAGPPG
IVTDGPPGLKGYPGAMGDQGLKGEKGFPGKTGPVGLPGPPTQKGDRGEPGQSILVGEIGD
NGIKGEKGEPGEEGIGGNRGYPGLDAEFGPKGQKGSPGIIGLAGRPGTKGERGISIRGPA
GLPGAPGLAGLSIGFGSVGPKGIDGEPGFNGTKGLKGEWGLVGLRGIDGDRGPEGKQGRN
GQMGKLGDSGPTGDTGETGVPGLKGYDGRQGIFGQIGEKGSRGDFGMEGAPGLKGQLGEK
GLTGNQGLPGLPGIRGDYSFSGPQGETGATGRVGDIGPTGYRGLDGQKGMRGDNGTTEIG
LAGEKGSKGEPGIDGKPGQSGRKGLMGDLGMVGDKGIIGDEGPKGYPGLKGRSGISGVKG
PPGSPGIPGIPGNKGQRGLDGMPGEIAKPGLPGDPGYRGAIGFEGLKGFKGLSGDPGYEG
FIIGTKGESGDRGHVHLRGSTGPPGLPGLQGIKGAKGVSGDEGAIGLIGFTGIYGIKGEQ
GDTGPEGLPGIPGSFPEHGEKGRSGIDGVPGSPGIDGQKGAPGEYGNDGIAGYAGPRGIS
PKGEKGKSGPRGESIQGEPGANGVPGKNGEPGRQGLKGLKGEPGIAKYSQKGEQGEFGSP
GLFGLQGEKGEIGEVGFEGMTGVPGLKGIQGIPGQPGISGFMGIPGIKGKKGDIGESLFY
NETQLRGMPGEDGYPGLTGLRGQPGENKYNGRDGLKGENGDDGFPGLPGKKGLKGLKGQM
GRQGNQGKYGPRGYTGRPGSPGSDALPMKPQPHQGNFFTYHSQTDIIPACPKNTVQLWSG
YSLLHFMSNAKAHGQDLGAPGSCLRKFNTMPFLFCDVNEVCNYGSRNDYSYWLSTPEPMP
LMMTPILGLDISKFISRCSVCEAPTKVIAVHSQSMAIPECPNGWSELWIGYSFIMHTDSG
ADGGGQSLVSPGSCLEEFRPRPFIECHGIGRCNFYTTAYSYWLSTIEDRDMFRKPRPQTL
KQNTLQTRISRCSVCLRNRY
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggcggcatttgccggcggctcggcgtcgtcgttctggtgatcgtaccatgt
ctgctgttgatggtccaagaaacgcaacaggcggcttgtagaggatgcagcaatccattt
aaatgtgactgtaagggaattgtcggagaacctggtgataagggtatttttggacaacaa
ggttcagaaggagctccaggagaaacaggtccggatggtccacctggaacaaaaggagag
aaaggatctattggagattggggagatctcggtttaaaaggatatcgaggtgaaaatgga
ctaactggtcaccacggaatcgacggtgataaaggatatccaggtgcagccgggccacca
ggactgaaaggtctagagggatgtaatggaacagatggtaatgatggacttatgggcgaa
gacggatatcccggtgagcgaggtctcacaggacttgatggtctacagggactacgagga
gatcctggcgatggaggggcaaatagtaaaggcctgaagggtgaaagaggcgaatcaagc
ttaccaggagtaaaaggcgaaccaggatatcctggaatcgaaggtgtgcaaggtgatatt
ggtgtgcccggagtacaaggacctactggtgatcctggatatgatggactgaagggtgat
gaaggtgactcccagccaggatataaaggtagtattggagacgatggagatcgcggagaa
ccaggagaaccaagtacaattgaaattgataatcctagcgttcaacctccggatcttatt
gtgtacaaaggacttccaggaaatcgtggtcctagaggagataacggaagacctgggtat
aaaggcgaaattggcactaaaggtcttaagggtcgtcctggatatgatggatttaaagga
gtaaaaggtgcacaaggtaatgtaggtcaaagaggaaaagatggaaatgttggtatattt
ggtgaaagtggcataaaaggtgataaaggagctccaggatactcaggactagcaggggag
gacggagataaaggtggaaatggtgaacctggacgtttaggaattccaggagtacagggt
agtgaaggtgaaccaggcatatatgatccaaatttggatgaaattaggaatggttctgaa
ggacctcaaggacctattggtcctgagggccccagaggagaagatggattacctggaagg
attggtcaacaaggaattatgggaccacctggtgaaccagggcccccaggtattcctgga
gcaagaggtccaaaaggattatctatgaaaggagaacaaggaattgaagggttggctgga
ccacgaggagaacaaggacctctaggagttcctggacctattggcccaattggtgaaaaa
ggaattcatggcataactgtatttggaccccctggtgaagatggtcgcttaggtcgtgat
ggttctgaaggtcctaaaggagaccagggtgatcaaggatttaaaggaccaaaaggtttc
cctgcaacacgaccgggcgaacgaattgttggtccacgtggagctcctggtatcccagga
ttttctggtatacctggagtgcctggatttcctggacttcctggtagaaatggatcaaaa
ggacttcggggagatgattgtggctactgcaatccaggcattgatggaccaaaaggtgat
gttggagttgatggacaaaatggtgcaccaggacctcctggatctgctggtttaaatgga
atacgaggaactaaaggaaagatgggtgcacctggattaccaggttataaaggatcatct
ggaagacctggctcaagaggactggctggataccctggaatgccaggagaaagaggaaca
gttatttttgttggtgttaaacaaacattaatatcgggtgaaaaaggtccaaaggggttc
cctggaagagaaggcgatatgggttcaataggactacctggattatctggattacctggc
cgtatgggtagaaaaggaatgaagggacattatggagattcaggattaccaggtaccgat
ggacgtcctggggaacatggtaggcctggacttaaaggagaccctgctgatgaattaaat
cctgaatacttaaaaggagacgaagggtatcctggtattactggtactaaaggtgaacaa
ggtaatgcaggtgcacctggtgaacctggtgatagcagccaatataccgctactaatata
ggagaaagaggcattaaaggcataccgggtgaaaaaggtcaacatggattaaaaggacaa
aagggagtagaaggagaccaaggttttgttggattttctggcgcggctggtcctcctggt
atagttactgatggtcctccagggttaaaaggatatcctggtgctatgggcgatcaagga
ttaaaaggagaaaaaggatttccgggaaaaaccggtcctgttggattaccaggtccacct
actcaaaagggagatcgcggagagccaggtcagagcatattggttggggaaattggagat
aacggtattaaaggagaaaaaggcgaacctggagaagaaggaattggtggcaatagaggt
tatcctggtttagatgcagaatttggtccaaagggtcaaaaaggcagtcctggtattata
ggcctagctggaagaccgggtacaaaaggtgaacgaggaatatcaattagaggacctgct
ggattacctggagcaccaggattagctggtttatcaattggttttggatcagttggccca
aaaggaattgacggtgaacctggtttcaatggaactaaaggcttaaaaggagaatgggga
ttagtaggactcagaggaattgatggtgatagaggtccggaaggtaaacaaggaagaaat
ggccaaatgggaaaactaggtgattctggtccgactggtgatactggggaaactggagtt
ccaggacttaagggttatgatggaagacagggtattttcggtcaaattggtgaaaaagga
agccgtggagattttggtatggaaggtgcacctgggttaaaaggacaactaggtgaaaag
ggactcacaggaaaccaagggcttcctggacttcctggtatacggggagattattcgttt
agtggtccacaaggagaaaccggtgccacgggaagagttggtgacattggtcctaccggt
tatcgtggattggacggccaaaagggtatgcgaggtgacaacggaacaacggaaattgga
ttagccggcgaaaaaggttctaaaggagaacctggaattgatggcaaacctggtcaatca
ggacgaaagggtttaatgggagacctaggtatggtgggagataaaggtattattggagac
gaaggtccaaaaggttacccaggattaaaaggacgatctggcatatcaggagtaaaagga
cctcctggatcaccaggtattcccggtataccaggtaataaagggcaacgtggattagat
ggcatgcctggtgaaatcgcaaaaccaggattacctggggacccaggatacagaggtgca
attggttttgaaggtttaaaaggattcaaaggactttctggagatccaggctatgaagga
tttattattgggacaaaaggagaatctggagaccgaggtcacgtgcatttaagaggttct
acaggtccacctggcttaccaggattacaaggaattaaaggagctaaaggtgtaagtggg
gatgaaggagcaattggactcattggatttacaggaatatatggaattaaaggagaacaa
ggggacactggtcctgaaggtctaccaggtatccctggctccttcccagaacatggtgaa
aaaggaagaagtggcatagatggagttcctggaagccctgggattgatggacaaaaagga
gcacctggagaatatggaaatgacgggattgcaggatatgctggaccacgtggaataagt
ccaaaaggagaaaaaggaaaatctggtcctagaggtgaatctatccaaggtgaacctgga
gctaacggtgtaccaggaaaaaatggagaacccggcagacaagggttaaaagggttgaaa
ggtgaacctggtattgcaaaatatagccaaaagggagaacagggtgagtttggttcgcct
ggattatttgggttacaaggcgaaaaaggtgaaattggagaagttgggtttgaagggatg
acaggtgttcccggtttaaaaggaatacaaggtataccaggacaacctggaatttcagga
tttatgggaatccctggtattaaaggcaaaaaaggagatattggagaatcactgttttat
aatgaaactcagcttagaggaatgcccggtgaagatggatatccaggattgacagggttg
cgtggacaacctggtgagaacaaatacaatggacgtgatggcttaaaaggagaaaatggt
gatgatggtttccctggcttacctggaaaaaaaggtctaaaaggtttaaaaggacaaatg
ggaagacaaggaaaccagggaaaatatggtccgagaggatatactggtcgacctggatca
cctggtagtgatgctctgccaatgaaaccacagccacaccaaggtaatttctttacatat
cattcccaaacggatattattccagcatgtccaaagaacactgttcaactctggtccggt
tattcgcttttacattttatgagcaatgctaaagcacatggacaagatttaggtgcaccg
ggtagttgtttgagaaaattcaatacaatgccattcttattctgtgatgtaaacgaagta
tgtaattatggaagtagaaatgattacagttattggctaagtactccagagccaatgcct
ttaatgatgacaccaattctaggtttagatatttcaaaattcatatcaagatgttctgtg
tgtgaagctccaacaaaagtaattgcagtgcacagtcaatcaatggccatacctgaatgt
ccaaatggttggagtgagttgtggattggatacagttttatcatgcataccgattccggt
gctgatggtggcggtcagtcgttggtcagcccaggttcgtgcttggaagagtttagacca
agaccgtttattgagtgccacggaataggacgctgtaacttctacactaccgcttattca
tactggttgtctacaatcgaagaccgagatatgttcaggaagccccggccccagacactc
aaacaaaatacattgcaaacgcgtatcagcaggtgctcagtgtgtttgagaaaccgatat
tga
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