Acyrthosiphon pisum (pea aphid): 100163626
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Entry
100163626 CDS
T01076
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100163626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
api03041
]
100163626
Spliceosome [BR:
api03041
]
Complex A
U1 snRNP components
U1 related factors
100163626
Complex B
100163626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
100163626
NCBI-ProteinID:
XP_001950893
APHIDBASE:
ACYPI004699
UniProt:
A0A8R2ABK1
LinkDB
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Position
A1
Genome browser
AA seq
775 aa
AA seq
DB search
MASPTSGPPLNTRIAPPMIPPPAFPPSTQMGFTPGAIPPGFMAAAPMGIGPPGMPPPFMP
PFNMNLPGEIVGAPVSFNKSISLPSNDETKPTSEWTEHKAPDDRLYYYNAGTKQSSWEKP
DELKTKTELLLDQCPWKEYKSDTGATYYHNINTKEASWTVPPELEELKMKIASEQGIIQA
PLIQQSLEIPIDRGMDSTDSGSAMDQAMAATLASIAVPDENRPTNNVSGKGFKSKFQAQE
VPILKNKQELIDAFKELLKKKNIPSNASWDQTVKVISRDPLYPQVKKLNEKRQLFNAYKT
QKQKDEKDEHRLKAKKAKEDLEKFFMKNEDVTSKTKYYRLEEKFEHLDIWRNVSEIDRRD
VYDDVMFTLAKREKEESKLQKKRNMKQLAAVLDSMTLVDHTTTWYQVQEMLLNNQNFVND
PKLLGMEKEDALTVFQDHIRELEKEEEHDKERERRRRKQQERKNRDNFGMFLEELHQQGK
LTSMSLWKELYPIISTDVRFSALLGQPGSTALDLFKFYVEDLKSRFHEEKKIIKEILKEH
SFIVDVSTKFEEFARVVCLDKQSETLDAGNVKLAYHGFVDKAEARERERLREENRRQRKL
ETAFRSLLKEMDVDYKSDWDDVRGQIENHQAFQAITLESERLRIFKEFILDTEEVCNHHH
SKMKKSKKNKKHKKKSRSKSLESTDSEYKYRKKTKEDSPDVISDSENRRRKNKKSKKKKH
SESPVTRSRSRSSSLRRSDLEDVKNKKNSKSAELSDDDLEAKRKALLAQLHDEMN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccgacctccggacctccactaaacacccgtatagcccctccgatgataccg
ccaccagcattccctccatcaactcagatgggctttacaccaggtgccatacctcccggc
tttatggctgcggcaccaatgggcattggaccgccaggcatgccaccaccgttcatgcct
ccgttcaacatgaacttgccaggcgaaattgttggagctccagtatcttttaacaaatcc
atttcactaccatcaaatgatgaaactaaacctacaagtgaatggactgaacataaggct
ccagatgacagattatattattataatgcaggaaccaaacaaagctcttgggaaaaacca
gatgagttaaaaacaaaaacagagctactattagatcaatgcccatggaaggaatacaaa
tcagatactggtgctacatactatcataacattaatacaaaagaagcaagttggaccgta
ccacctgaattagaagagttaaaaatgaaaattgcctctgaacagggaataattcaagct
ccactaatacagcagtccttggaaattccaattgatagaggaatggattcaacagattct
ggatcagctatggatcaagcaatggcagctactttagcttctatagctgttcctgatgaa
aatagacctaccaataatgtatctggcaaagggttcaaatctaaattccaagcacaagaa
gttccaattttgaaaaataaacaagaattaattgatgcgttcaaagaacttcttaagaaa
aagaatattccaagcaatgcgtcatgggatcaaactgtgaaagttattagtcgtgatcca
ctttatccacaagtaaagaagttaaatgaaaaaaggcaactttttaatgcatataaaaca
caaaaacaaaaagatgaaaaagatgaacatcgattaaaagctaaaaaggctaaagaggat
ctagaaaagttttttatgaaaaatgaagatgtcacgtctaagacaaagtattacagacta
gaagagaaatttgagcatttagatatttggaggaatgtgtctgaaattgatcgacgtgat
gtatatgatgatgtcatgtttactttagccaaaagagagaaagaagaatctaaattacaa
aaaaaacgtaacatgaaacaattagcagcagtattggattctatgacactagttgatcat
acaacaacttggtatcaagttcaagaaatgcttcttaacaatcaaaattttgttaatgat
ccaaaattattgggcatggagaaagaagatgctcttacagtattccaagatcatatcaga
gaattagaaaaagaagaagaacatgataaagaaagagaaagaagaagaagaaaacaacag
gagcgcaaaaaccgtgataactttggtatgtttttggaagaactccatcaacaaggcaaa
ttaacatcaatgtcattatggaaagagttatatcctattataagtacagatgttagattt
tcagctcttcttggtcaacctggttctacagctttagatctttttaaattctatgtggaa
gatttgaaatccagatttcatgaagaaaaaaaaattattaaagaaatactcaaggaacac
tcatttatagttgatgtaagtactaaatttgaagagtttgctcgagtagtctgcttggat
aaacaatcggaaactttggatgctggcaatgtgaaattggcctatcatggttttgttgac
aaagctgaagcgagagaaagagaaagattacgggaagaaaatagaagacagcggaaatta
gaaacagcattccgttcgttgcttaaagaaatggacgttgactataaatctgattgggat
gatgtacgtggacaaattgagaaccaccaagccttccaagccataactttagaatctgaa
agacttcgtatttttaaggaattcatacttgatacagaagaagtttgtaatcatcatcat
tctaaaatgaaaaaatcaaagaaaaataaaaaacataaaaagaaatctcgatcaaaatca
ttggaatccactgattctgaatataagtatagaaaaaagaccaaagaggattcgcctgac
gtcataagcgatagtgaaaaccgaaggcgaaaaaataagaaatcgaaaaaaaagaaacat
tcagaaagtcctgtcacccgatctcgttctaggtcgtcgagtctgaggagatctgattta
gaagatgtgaaaaataagaaaaattccaaatctgctgaattgagtgatgacgatttagaa
gctaaacgaaaagcattgcttgctcagttgcatgatgaaatgaactaa
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